Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Gm18284-201ENSMUST00000172604 624 ntBASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Gm26524-201ENSMUST00000192339 390 ntBASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trim6Q8BGE7 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trim6Q8BGE7 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim6Q8BGE7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
Trim6Q8BGE7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim6Q8BGE7 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim6Q8BGE7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trim6Q8BGE7 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim6Q8BGE7 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.08■□□□□ 0.48
Trim6Q8BGE7 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.08■□□□□ 0.48
Trim6Q8BGE7 Rab3c-203ENSMUST00000224180 967 ntBASIC18.08■□□□□ 0.48
Trim6Q8BGE7 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim6Q8BGE7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim6Q8BGE7 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim6Q8BGE7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trim6Q8BGE7 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Trim6Q8BGE7 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Gm13401-201ENSMUST00000117074 291 ntBASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Gm11927-201ENSMUST00000118472 759 ntBASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trim6Q8BGE7 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.06■□□□□ 0.48
Trim6Q8BGE7 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim6Q8BGE7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Gm15847-201ENSMUST00000121417 1065 ntBASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim6Q8BGE7 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms