Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Scn4bQ7M729 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Scn4bQ7M729 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.56■□□□□ 0.24
Scn4bQ7M729 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn4bQ7M729 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Scn4bQ7M729 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Scn4bQ7M729 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Gm7638-201ENSMUST00000121348 967 ntBASIC16.55■□□□□ 0.24
Scn4bQ7M729 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.55■□□□□ 0.24
Scn4bQ7M729 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn4bQ7M729 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Scn4bQ7M729 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Timm23-208ENSMUST00000226683 750 ntBASIC16.54■□□□□ 0.24
Scn4bQ7M729 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.54■□□□□ 0.24
Scn4bQ7M729 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.54■□□□□ 0.24
Scn4bQ7M729 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Scn4bQ7M729 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn4bQ7M729 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Scn4bQ7M729 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Gm9731-201ENSMUST00000209480 747 ntBASIC16.52■□□□□ 0.24
Scn4bQ7M729 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Scn4bQ7M729 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn4bQ7M729 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn4bQ7M729 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn4bQ7M729 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Scn4bQ7M729 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn4bQ7M729 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn4bQ7M729 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Scn4bQ7M729 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Scn4bQ7M729 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn4bQ7M729 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Scn4bQ7M729 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Scn4bQ7M729 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.51■□□□□ 0.23
Scn4bQ7M729 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn4bQ7M729 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms