Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pabpn1lQ5XFR0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pabpn1lQ5XFR0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Pabpn1lQ5XFR0 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Pabpn1lQ5XFR0 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Pabpn1lQ5XFR0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Mir8112-201ENSMUST00000184382 131 ntBASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Pabpn1lQ5XFR0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pabpn1lQ5XFR0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Gm27405-201ENSMUST00000184201 112 ntBASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pabpn1lQ5XFR0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms