Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Tdp2-203ENSMUST00000223804 1136 ntBASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav3-1Q5R1I8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Trav3-1Q5R1I8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Asic1-205ENSMUST00000228185 1818 ntBASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav3-1Q5R1I8 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav3-1Q5R1I8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Gm44616-201ENSMUST00000206417 1732 ntBASIC11.56□□□□□ -0.56
Trav3-1Q5R1I8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms