Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Gm27000-201ENSMUST00000182943 842 ntBASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav6-2Q5R1I4 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav6-2Q5R1I4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Gm10616-201ENSMUST00000205285 2127 ntBASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav6-2Q5R1I4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Gm7461-201ENSMUST00000058918 827 ntBASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-2Q5R1I4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-2Q5R1I4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav6-2Q5R1I4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms