Protein–RNA interactions for Protein: Q5R1I1

Trav7d-3, T cell receptor alpha variable 7-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-3Q5R1I1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav7d-3Q5R1I1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7d-3Q5R1I1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7d-3Q5R1I1 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav7d-3Q5R1I1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav7d-3Q5R1I1 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7d-3Q5R1I1 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav7d-3Q5R1I1 Gm10654-201ENSMUST00000098653 1633 ntBASIC12.52□□□□□ -0.4
Trav7d-3Q5R1I1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav7d-3Q5R1I1 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav7d-3Q5R1I1 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Gm12896-201ENSMUST00000118430 226 ntBASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Gm13158-201ENSMUST00000122007 736 ntBASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav7d-3Q5R1I1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Gm6576-201ENSMUST00000169678 883 ntBASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav7d-3Q5R1I1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 AC163280.1-201ENSMUST00000228194 1100 ntBASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav7d-3Q5R1I1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms