Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Gm37166-201ENSMUST00000195473 2474 ntBASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trav6-3Q5R1E6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Gm12441-201ENSMUST00000121806 588 ntBASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Gm17661-201ENSMUST00000170317 270 ntBASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Gm37025-201ENSMUST00000195159 829 ntBASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trav6-3Q5R1E6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Trav6-3Q5R1E6 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav6-3Q5R1E6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Gm43183-201ENSMUST00000200632 547 ntBASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav6-3Q5R1E6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav6-3Q5R1E6 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms