Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rc3h1Q4VGL6 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rc3h1Q4VGL6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rc3h1Q4VGL6 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rc3h1Q4VGL6 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rc3h1Q4VGL6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.74
Rc3h1Q4VGL6 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rc3h1Q4VGL6 Gm13186-201ENSMUST00000118031 316 ntBASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rc3h1Q4VGL6 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Gm11950-201ENSMUST00000121615 838 ntBASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Gm6623-201ENSMUST00000173570 544 ntBASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.63■□□□□ 0.73
Rc3h1Q4VGL6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.62■□□□□ 0.73
Rc3h1Q4VGL6 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.61■□□□□ 0.73
Rc3h1Q4VGL6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Gm11336-201ENSMUST00000118168 334 ntBASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rc3h1Q4VGL6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.59■□□□□ 0.73
Rc3h1Q4VGL6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms