Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ube2d3P61079 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube2d3P61079 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ube2d3P61079 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ube2d3P61079 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.2□□□□□ -0.46
Ube2d3P61079 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Ube2d3P61079 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ube2d3P61079 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Ube2d3P61079 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ube2d3P61079 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.19□□□□□ -0.46
Ube2d3P61079 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.19□□□□□ -0.46
Ube2d3P61079 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ube2d3P61079 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC12.19□□□□□ -0.46
Ube2d3P61079 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.19□□□□□ -0.46
Ube2d3P61079 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ube2d3P61079 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ube2d3P61079 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.18□□□□□ -0.46
Ube2d3P61079 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Gm21596-201ENSMUST00000178049 1316 ntBASIC12.18□□□□□ -0.46
Ube2d3P61079 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ube2d3P61079 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Gm10602-201ENSMUST00000098239 609 ntBASIC12.18□□□□□ -0.46
Ube2d3P61079 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Ube2d3P61079 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Ube2d3P61079 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ube2d3P61079 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ube2d3P61079 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Ube2d3P61079 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Gm12896-201ENSMUST00000118430 226 ntBASIC12.17□□□□□ -0.46
Ube2d3P61079 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC12.17□□□□□ -0.46
Ube2d3P61079 Alkbh1-212ENSMUST00000185301 408 ntBASIC12.17□□□□□ -0.46
Ube2d3P61079 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC12.17□□□□□ -0.46
Ube2d3P61079 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.17□□□□□ -0.46
Ube2d3P61079 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Ube2d3P61079 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ube2d3P61079 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2d3P61079 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Ube2d3P61079 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2d3P61079 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Ube2d3P61079 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2d3P61079 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.16□□□□□ -0.46
Ube2d3P61079 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2d3P61079 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.16□□□□□ -0.46
Ube2d3P61079 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2d3P61079 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2d3P61079 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Ube2d3P61079 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms