Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Pdx1P52946 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Pdx1P52946 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.84■□□□□ 0.29
Pdx1P52946 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pdx1P52946 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Pdx1P52946 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Pdx1P52946 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pdx1P52946 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pdx1P52946 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdx1P52946 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.83■□□□□ 0.28
Pdx1P52946 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pdx1P52946 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pdx1P52946 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdx1P52946 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Pdx1P52946 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdx1P52946 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pdx1P52946 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdx1P52946 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Pdx1P52946 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pdx1P52946 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdx1P52946 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pdx1P52946 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdx1P52946 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pdx1P52946 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdx1P52946 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pdx1P52946 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdx1P52946 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.82■□□□□ 0.28
Pdx1P52946 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pdx1P52946 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdx1P52946 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdx1P52946 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pdx1P52946 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC16.82■□□□□ 0.28
Pdx1P52946 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Gm27000-201ENSMUST00000182943 842 ntBASIC16.81■□□□□ 0.28
Pdx1P52946 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.81■□□□□ 0.28
Pdx1P52946 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Pdx1P52946 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pdx1P52946 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.8■□□□□ 0.28
Pdx1P52946 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.8■□□□□ 0.28
Pdx1P52946 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.8■□□□□ 0.28
Pdx1P52946 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pdx1P52946 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pdx1P52946 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pdx1P52946 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pdx1P52946 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pdx1P52946 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdx1P52946 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.79■□□□□ 0.28
Pdx1P52946 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdx1P52946 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pdx1P52946 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.79■□□□□ 0.28
Pdx1P52946 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pdx1P52946 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pdx1P52946 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.79■□□□□ 0.28
Pdx1P52946 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdx1P52946 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pdx1P52946 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.79■□□□□ 0.28
Pdx1P52946 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pdx1P52946 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pdx1P52946 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms