Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SqleP52019 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SqleP52019 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SqleP52019 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.45■□□□□ 0.54
SqleP52019 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SqleP52019 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SqleP52019 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SqleP52019 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SqleP52019 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.44■□□□□ 0.54
SqleP52019 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SqleP52019 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SqleP52019 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.44■□□□□ 0.54
SqleP52019 Gm27000-201ENSMUST00000182943 842 ntBASIC18.44■□□□□ 0.54
SqleP52019 Gm29707-201ENSMUST00000196325 491 ntBASIC18.44■□□□□ 0.54
SqleP52019 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.44■□□□□ 0.54
SqleP52019 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SqleP52019 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SqleP52019 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
SqleP52019 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 Gm14822-201ENSMUST00000122247 291 ntBASIC18.43■□□□□ 0.54
SqleP52019 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SqleP52019 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.43■□□□□ 0.54
SqleP52019 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.43■□□□□ 0.54
SqleP52019 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
SqleP52019 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.43■□□□□ 0.54
SqleP52019 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.43■□□□□ 0.54
SqleP52019 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 BC021767-201ENSMUST00000126387 1716 ntBASIC18.43■□□□□ 0.54
SqleP52019 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SqleP52019 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SqleP52019 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SqleP52019 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SqleP52019 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SqleP52019 Gm37374-201ENSMUST00000194954 1829 ntBASIC18.42■□□□□ 0.54
SqleP52019 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SqleP52019 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.42■□□□□ 0.54
SqleP52019 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SqleP52019 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.42■□□□□ 0.54
SqleP52019 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.42■□□□□ 0.54
SqleP52019 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SqleP52019 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SqleP52019 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.42■□□□□ 0.54
SqleP52019 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SqleP52019 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
SqleP52019 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SqleP52019 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.41■□□□□ 0.54
SqleP52019 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SqleP52019 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SqleP52019 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.41■□□□□ 0.54
SqleP52019 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC18.41■□□□□ 0.54
SqleP52019 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
SqleP52019 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.41■□□□□ 0.54
SqleP52019 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SqleP52019 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC18.41■□□□□ 0.54
SqleP52019 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SqleP52019 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SqleP52019 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SqleP52019 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SqleP52019 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
SqleP52019 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SqleP52019 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SqleP52019 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SqleP52019 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SqleP52019 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.4■□□□□ 0.54
SqleP52019 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC18.4■□□□□ 0.54
SqleP52019 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.4■□□□□ 0.54
SqleP52019 Gm7230-201ENSMUST00000173026 815 ntBASIC18.4■□□□□ 0.54
SqleP52019 Mir8112-201ENSMUST00000184382 131 ntBASIC18.4■□□□□ 0.54
SqleP52019 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC18.4■□□□□ 0.54
SqleP52019 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.4■□□□□ 0.54
SqleP52019 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SqleP52019 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SqleP52019 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SqleP52019 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SqleP52019 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SqleP52019 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms