Protein–RNA interactions for Protein: P41245

Mmp9, Matrix metalloproteinase-9, mousemouse

Predictions only

Length 730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp9P41245 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Mmp9P41245 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Mmp9P41245 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Mmp9P41245 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Mmp9P41245 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Mmp9P41245 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.3□□□□□ -0.12
Mmp9P41245 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.3□□□□□ -0.12
Mmp9P41245 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Mmp9P41245 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Mmp9P41245 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Mmp9P41245 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Mmp9P41245 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Mmp9P41245 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Mmp9P41245 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC14.29□□□□□ -0.12
Mmp9P41245 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.29□□□□□ -0.12
Mmp9P41245 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.29□□□□□ -0.12
Mmp9P41245 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Mmp9P41245 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Mmp9P41245 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Mmp9P41245 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.29□□□□□ -0.12
Mmp9P41245 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Mmp9P41245 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Mmp9P41245 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Mmp9P41245 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Mmp9P41245 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Mmp9P41245 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Mmp9P41245 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.28□□□□□ -0.12
Mmp9P41245 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Mmp9P41245 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.28□□□□□ -0.12
Mmp9P41245 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Mmp9P41245 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
Mmp9P41245 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.28□□□□□ -0.12
Mmp9P41245 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Mmp9P41245 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Mmp9P41245 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Mmp9P41245 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp9P41245 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Mmp9P41245 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp9P41245 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp9P41245 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC14.27□□□□□ -0.12
Mmp9P41245 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Mmp9P41245 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Mmp9P41245 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms