Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Abca1P41233 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Abca1P41233 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abca1P41233 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abca1P41233 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abca1P41233 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Abca1P41233 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.08□□□□□ -0.16
Abca1P41233 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Abca1P41233 Mzt1-203ENSMUST00000227948 952 ntBASIC14.08□□□□□ -0.16
Abca1P41233 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abca1P41233 Gm5867-201ENSMUST00000063197 592 ntBASIC14.08□□□□□ -0.16
Abca1P41233 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Abca1P41233 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Abca1P41233 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abca1P41233 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abca1P41233 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Abca1P41233 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Abca1P41233 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Gm13401-201ENSMUST00000117074 291 ntBASIC14.07□□□□□ -0.16
Abca1P41233 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.07□□□□□ -0.16
Abca1P41233 Gm18115-201ENSMUST00000221209 621 ntBASIC14.07□□□□□ -0.16
Abca1P41233 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Abca1P41233 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.07□□□□□ -0.16
Abca1P41233 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Abca1P41233 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Abca1P41233 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abca1P41233 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.06□□□□□ -0.16
Abca1P41233 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.06□□□□□ -0.16
Abca1P41233 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.06□□□□□ -0.16
Abca1P41233 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.06□□□□□ -0.16
Abca1P41233 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.06□□□□□ -0.16
Abca1P41233 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Abca1P41233 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Abca1P41233 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Abca1P41233 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 AC123834.2-201ENSMUST00000224038 2340 ntBASIC14.06□□□□□ -0.16
Abca1P41233 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.06□□□□□ -0.16
Abca1P41233 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Abca1P41233 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Abca1P41233 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Abca1P41233 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC14.06□□□□□ -0.16
Abca1P41233 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Abca1P41233 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.06□□□□□ -0.16
Abca1P41233 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abca1P41233 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.05□□□□□ -0.16
Abca1P41233 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.05□□□□□ -0.16
Abca1P41233 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.05□□□□□ -0.16
Abca1P41233 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC14.05□□□□□ -0.16
Abca1P41233 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Abca1P41233 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Gm10418-201ENSMUST00000100943 576 ntBASIC14.04□□□□□ -0.16
Abca1P41233 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Abca1P41233 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.04□□□□□ -0.16
Abca1P41233 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.04□□□□□ -0.16
Abca1P41233 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.04□□□□□ -0.16
Abca1P41233 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Abca1P41233 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms