Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Mir5133-201ENSMUST00000174955 77 ntBASIC14.66□□□□□ -0.06
Slc6a1P31648 Mir8112-201ENSMUST00000184382 131 ntBASIC14.66□□□□□ -0.06
Slc6a1P31648 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Slc6a1P31648 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Slc6a1P31648 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
Slc6a1P31648 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Slc6a1P31648 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.65□□□□□ -0.06
Slc6a1P31648 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.65□□□□□ -0.06
Slc6a1P31648 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Slc6a1P31648 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.65□□□□□ -0.06
Slc6a1P31648 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Slc6a1P31648 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.65□□□□□ -0.06
Slc6a1P31648 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Slc6a1P31648 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Slc6a1P31648 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Slc6a1P31648 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC14.64□□□□□ -0.07
Slc6a1P31648 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.64□□□□□ -0.07
Slc6a1P31648 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Slc6a1P31648 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Slc6a1P31648 Gm13534-201ENSMUST00000121169 513 ntBASIC14.64□□□□□ -0.07
Slc6a1P31648 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.64□□□□□ -0.07
Slc6a1P31648 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.64□□□□□ -0.07
Slc6a1P31648 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.64□□□□□ -0.07
Slc6a1P31648 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.64□□□□□ -0.07
Slc6a1P31648 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Slc6a1P31648 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.64□□□□□ -0.07
Slc6a1P31648 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Slc6a1P31648 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.63□□□□□ -0.07
Slc6a1P31648 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.63□□□□□ -0.07
Slc6a1P31648 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Slc6a1P31648 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.63□□□□□ -0.07
Slc6a1P31648 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Slc6a1P31648 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.63□□□□□ -0.07
Slc6a1P31648 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Slc6a1P31648 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Gm38205-201ENSMUST00000192243 258 ntBASIC14.63□□□□□ -0.07
Slc6a1P31648 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Slc6a1P31648 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms