Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cdx1P18111 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC13.74□□□□□ -0.21
Cdx1P18111 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.74□□□□□ -0.21
Cdx1P18111 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Cdx1P18111 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.74□□□□□ -0.21
Cdx1P18111 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdx1P18111 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Cdx1P18111 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Cdx1P18111 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Cdx1P18111 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC13.73□□□□□ -0.21
Cdx1P18111 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdx1P18111 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Cdx1P18111 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdx1P18111 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdx1P18111 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.72□□□□□ -0.21
Cdx1P18111 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdx1P18111 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdx1P18111 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cdx1P18111 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.72□□□□□ -0.21
Cdx1P18111 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdx1P18111 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdx1P18111 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Cdx1P18111 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdx1P18111 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdx1P18111 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Gm43859-201ENSMUST00000200075 1412 ntBASIC13.72□□□□□ -0.21
Cdx1P18111 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdx1P18111 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdx1P18111 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cdx1P18111 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdx1P18111 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdx1P18111 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cdx1P18111 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Cdx1P18111 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Gm20049-201ENSMUST00000219950 730 ntBASIC13.71□□□□□ -0.21
Cdx1P18111 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdx1P18111 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.71□□□□□ -0.21
Cdx1P18111 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx1P18111 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx1P18111 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx1P18111 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx1P18111 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cdx1P18111 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC13.71□□□□□ -0.22
Cdx1P18111 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.7□□□□□ -0.22
Cdx1P18111 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx1P18111 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cdx1P18111 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cdx1P18111 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC13.7□□□□□ -0.22
Cdx1P18111 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms