Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.28■□□□□ 0.2
Hcn1O88704 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.28■□□□□ 0.2
Hcn1O88704 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Hcn1O88704 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Dancr-204ENSMUST00000132389 2347 ntBASIC16.28■□□□□ 0.2
Hcn1O88704 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Hcn1O88704 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hcn1O88704 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Hcn1O88704 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Hcn1O88704 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Gm10418-201ENSMUST00000100943 576 ntBASIC16.27■□□□□ 0.2
Hcn1O88704 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.27■□□□□ 0.2
Hcn1O88704 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.27■□□□□ 0.2
Hcn1O88704 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.27■□□□□ 0.2
Hcn1O88704 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Hcn1O88704 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Hcn1O88704 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Hcn1O88704 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hcn1O88704 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Hcn1O88704 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Hcn1O88704 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Hcn1O88704 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Gm37820-201ENSMUST00000194021 2147 ntBASIC16.26■□□□□ 0.19
Hcn1O88704 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Hcn1O88704 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.26■□□□□ 0.19
Hcn1O88704 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.26■□□□□ 0.19
Hcn1O88704 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.26■□□□□ 0.19
Hcn1O88704 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Hcn1O88704 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Hcn1O88704 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.26■□□□□ 0.19
Hcn1O88704 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.25■□□□□ 0.19
Hcn1O88704 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Hcn1O88704 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Gm29791-202ENSMUST00000207888 369 ntBASIC16.25■□□□□ 0.19
Hcn1O88704 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Hcn1O88704 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Hcn1O88704 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.25■□□□□ 0.19
Hcn1O88704 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.25■□□□□ 0.19
Hcn1O88704 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Hcn1O88704 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.25■□□□□ 0.19
Hcn1O88704 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms