Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Rpl35aO55142 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC12.69□□□□□ -0.38
Rpl35aO55142 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rpl35aO55142 Gm13836-201ENSMUST00000121159 501 ntBASIC12.69□□□□□ -0.38
Rpl35aO55142 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rpl35aO55142 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.69□□□□□ -0.38
Rpl35aO55142 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rpl35aO55142 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rpl35aO55142 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rpl35aO55142 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rpl35aO55142 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rpl35aO55142 Gm7638-201ENSMUST00000121348 967 ntBASIC12.68□□□□□ -0.38
Rpl35aO55142 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC12.68□□□□□ -0.38
Rpl35aO55142 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.68□□□□□ -0.38
Rpl35aO55142 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rpl35aO55142 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rpl35aO55142 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC12.68□□□□□ -0.38
Rpl35aO55142 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Rpl35aO55142 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rpl35aO55142 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Rpl35aO55142 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.67□□□□□ -0.38
Rpl35aO55142 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.67□□□□□ -0.38
Rpl35aO55142 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rpl35aO55142 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.67□□□□□ -0.38
Rpl35aO55142 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Rpl35aO55142 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.66□□□□□ -0.38
Rpl35aO55142 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Gm6433-201ENSMUST00000118634 875 ntBASIC12.66□□□□□ -0.38
Rpl35aO55142 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Rpl35aO55142 Gm7889-201ENSMUST00000185591 958 ntBASIC12.66□□□□□ -0.38
Rpl35aO55142 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.66□□□□□ -0.38
Rpl35aO55142 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Rpl35aO55142 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Rpl35aO55142 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.65□□□□□ -0.38
Rpl35aO55142 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rpl35aO55142 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms