Protein–RNA interactions for Protein: O35609

Scamp3, Secretory carrier-associated membrane protein 3, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scamp3O35609 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.92■□□□□ 0.3
Scamp3O35609 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Scamp3O35609 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.92■□□□□ 0.3
Scamp3O35609 Gm2274-201ENSMUST00000184539 609 ntBASIC16.92■□□□□ 0.3
Scamp3O35609 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 Gm9731-201ENSMUST00000209480 747 ntBASIC16.92■□□□□ 0.3
Scamp3O35609 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.92■□□□□ 0.3
Scamp3O35609 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.92■□□□□ 0.3
Scamp3O35609 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scamp3O35609 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Scamp3O35609 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Scamp3O35609 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scamp3O35609 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.91■□□□□ 0.3
Scamp3O35609 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scamp3O35609 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Scamp3O35609 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.91■□□□□ 0.3
Scamp3O35609 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.91■□□□□ 0.3
Scamp3O35609 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC16.91■□□□□ 0.3
Scamp3O35609 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.91■□□□□ 0.3
Scamp3O35609 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Scamp3O35609 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Scamp3O35609 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.91■□□□□ 0.3
Scamp3O35609 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Scamp3O35609 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Scamp3O35609 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
Scamp3O35609 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.9■□□□□ 0.3
Scamp3O35609 Gm37025-201ENSMUST00000195159 829 ntBASIC16.9■□□□□ 0.3
Scamp3O35609 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scamp3O35609 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.9■□□□□ 0.3
Scamp3O35609 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Scamp3O35609 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Scamp3O35609 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Scamp3O35609 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Scamp3O35609 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Scamp3O35609 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Scamp3O35609 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scamp3O35609 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.89■□□□□ 0.29
Scamp3O35609 Gm7370-201ENSMUST00000219471 767 ntBASIC16.89■□□□□ 0.29
Scamp3O35609 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scamp3O35609 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Scamp3O35609 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Scamp3O35609 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Scamp3O35609 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
Scamp3O35609 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Scamp3O35609 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.89■□□□□ 0.29
Scamp3O35609 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Scamp3O35609 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp3O35609 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp3O35609 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Scamp3O35609 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms