Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc1G3X9F6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc1G3X9F6 Gm11452-201ENSMUST00000122376 690 ntBASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Sh3tc1G3X9F6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3tc1G3X9F6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Sh3tc1G3X9F6 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.52■□□□□ 0.88
Sh3tc1G3X9F6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3tc1G3X9F6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3tc1G3X9F6 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3tc1G3X9F6 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC20.52■□□□□ 0.88
Sh3tc1G3X9F6 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Sh3tc1G3X9F6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3tc1G3X9F6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Sh3tc1G3X9F6 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
Sh3tc1G3X9F6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC20.52■□□□□ 0.87
Sh3tc1G3X9F6 Gm12644-201ENSMUST00000119935 606 ntBASIC20.52■□□□□ 0.87
Sh3tc1G3X9F6 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC20.52■□□□□ 0.87
Sh3tc1G3X9F6 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Sh3tc1G3X9F6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Sh3tc1G3X9F6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Sh3tc1G3X9F6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC20.52■□□□□ 0.87
Sh3tc1G3X9F6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Sh3tc1G3X9F6 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.52■□□□□ 0.87
Sh3tc1G3X9F6 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3tc1G3X9F6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
Sh3tc1G3X9F6 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3tc1G3X9F6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3tc1G3X9F6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC20.51■□□□□ 0.87
Sh3tc1G3X9F6 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC20.51■□□□□ 0.87
Sh3tc1G3X9F6 Gm18195-201ENSMUST00000207604 706 ntBASIC20.51■□□□□ 0.87
Sh3tc1G3X9F6 AW822252-206ENSMUST00000208904 237 ntBASIC20.51■□□□□ 0.87
Sh3tc1G3X9F6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3tc1G3X9F6 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3tc1G3X9F6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3tc1G3X9F6 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Gm13312-201ENSMUST00000119631 718 ntBASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Rprl3-201ENSMUST00000157400 290 ntBASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Gm18733-201ENSMUST00000173950 856 ntBASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc1G3X9F6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Sh3tc1G3X9F6 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms