Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb9E9Q5G2 Gm6598-201ENSMUST00000202719 2615 ntBASIC20.02■□□□□ 0.79
Pcdhb9E9Q5G2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb9E9Q5G2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb9E9Q5G2 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb9E9Q5G2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb9E9Q5G2 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Phf7-203ENSMUST00000226565 1971 ntBASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcdhb9E9Q5G2 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 AA414768-201ENSMUST00000121924 1257 ntBASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb9E9Q5G2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Gm11355-201ENSMUST00000121120 306 ntBASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Gm8258-201ENSMUST00000055593 1449 ntBASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb9E9Q5G2 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Gm6345-202ENSMUST00000180900 204 ntBASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb9E9Q5G2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms