Protein–RNA interactions for Protein: E9PYU5

Gm44503, Predicted readthrough transcript (NMD candidate), 44503, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm44503E9PYU5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm44503E9PYU5 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm44503E9PYU5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm44503E9PYU5 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
Gm44503E9PYU5 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm44503E9PYU5 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Gm44503E9PYU5 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.51■□□□□ 0.71
Gm44503E9PYU5 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm44503E9PYU5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Gm44503E9PYU5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Gm44503E9PYU5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Gm44503E9PYU5 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Gm6443-201ENSMUST00000203599 874 ntBASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Gm44503E9PYU5 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm44503E9PYU5 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm44503E9PYU5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm44503E9PYU5 Gm13186-201ENSMUST00000118031 316 ntBASIC19.49■□□□□ 0.71
Gm44503E9PYU5 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm44503E9PYU5 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Gm44503E9PYU5 Gm43514-201ENSMUST00000198852 424 ntBASIC19.49■□□□□ 0.71
Gm44503E9PYU5 Gm43347-201ENSMUST00000200226 580 ntBASIC19.49■□□□□ 0.71
Gm44503E9PYU5 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
Gm44503E9PYU5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.49■□□□□ 0.71
Gm44503E9PYU5 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC19.49■□□□□ 0.71
Gm44503E9PYU5 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Gm44503E9PYU5 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Mir8098-201ENSMUST00000184011 137 ntBASIC19.48■□□□□ 0.71
Gm44503E9PYU5 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Gm44503E9PYU5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Gm44503E9PYU5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Gm44503E9PYU5 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gm44503E9PYU5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm44503E9PYU5 Gm13884-201ENSMUST00000118103 829 ntBASIC19.46■□□□□ 0.71
Gm44503E9PYU5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.46■□□□□ 0.71
Gm44503E9PYU5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm44503E9PYU5 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Gm44503E9PYU5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC19.46■□□□□ 0.71
Gm44503E9PYU5 Phf7-203ENSMUST00000226565 1971 ntBASIC19.46■□□□□ 0.71
Gm44503E9PYU5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Gm44503E9PYU5 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Gm44503E9PYU5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm44503E9PYU5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm44503E9PYU5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Gm44503E9PYU5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm44503E9PYU5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm44503E9PYU5 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Gm44503E9PYU5 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm44503E9PYU5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm44503E9PYU5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Gm44503E9PYU5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm44503E9PYU5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Gm44503E9PYU5 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Gm44503E9PYU5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms