Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28043E0CXC2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Gm28043E0CXC2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28043E0CXC2 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm28043E0CXC2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.08■□□□□ 0.33
Gm28043E0CXC2 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28043E0CXC2 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Gm28043E0CXC2 Gm13158-201ENSMUST00000122007 736 ntBASIC17.08■□□□□ 0.32
Gm28043E0CXC2 Gm10138-203ENSMUST00000206952 366 ntBASIC17.08■□□□□ 0.32
Gm28043E0CXC2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28043E0CXC2 Mtag2-201ENSMUST00000058665 714 ntBASIC17.08■□□□□ 0.32
Gm28043E0CXC2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28043E0CXC2 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28043E0CXC2 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28043E0CXC2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28043E0CXC2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm28043E0CXC2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Alkbh1-212ENSMUST00000185301 408 ntBASIC17.07■□□□□ 0.32
Gm28043E0CXC2 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
Gm28043E0CXC2 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Gm28043E0CXC2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Gm10653-202ENSMUST00000139570 835 ntBASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Mir2861-201ENSMUST00000175539 82 ntBASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Gm20760-201ENSMUST00000179197 648 ntBASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Mir6349-201ENSMUST00000184059 97 ntBASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Gm28043E0CXC2 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Gm18666-201ENSMUST00000190039 958 ntBASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Gm28043E0CXC2 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gm28043E0CXC2 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms