Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.09■□□□□ 0.01
Gm11127A7VMS2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm11127A7VMS2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.09■□□□□ 0.01
Gm11127A7VMS2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Gm11127A7VMS2 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm11127A7VMS2 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.08■□□□□ 0.01
Gm11127A7VMS2 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm11127A7VMS2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm11127A7VMS2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Gm11127A7VMS2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Gm27405-201ENSMUST00000184201 112 ntBASIC15.08■□□□□ 0
Gm11127A7VMS2 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.08■□□□□ 0
Gm11127A7VMS2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Gm11127A7VMS2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.08■□□□□ 0
Gm11127A7VMS2 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Gm11127A7VMS2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.07■□□□□ 0
Gm11127A7VMS2 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.07■□□□□ 0
Gm11127A7VMS2 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Gm11127A7VMS2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.07■□□□□ 0
Gm11127A7VMS2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC15.07■□□□□ 0
Gm11127A7VMS2 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.07■□□□□ 0
Gm11127A7VMS2 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.07■□□□□ 0
Gm11127A7VMS2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Gm11127A7VMS2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.06■□□□□ 0
Gm11127A7VMS2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Gm11127A7VMS2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.06■□□□□ 0
Gm11127A7VMS2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Gm11127A7VMS2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.06■□□□□ 0
Gm11127A7VMS2 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.06■□□□□ 0
Gm11127A7VMS2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.06■□□□□ 0
Gm11127A7VMS2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.06■□□□□ 0
Gm11127A7VMS2 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm11127A7VMS2 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.06■□□□□ 0
Gm11127A7VMS2 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.05■□□□□ 0
Gm11127A7VMS2 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.05■□□□□ 0
Gm11127A7VMS2 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Gm11127A7VMS2 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Gm11127A7VMS2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.05■□□□□ 0
Gm11127A7VMS2 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.05■□□□□ 0
Gm11127A7VMS2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Gm11127A7VMS2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Gm11127A7VMS2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Gm11127A7VMS2 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Gm11127A7VMS2 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Gm11127A7VMS2 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm11127A7VMS2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.05■□□□□ -0
Gm11127A7VMS2 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.05■□□□□ -0
Gm11127A7VMS2 Mir5133-201ENSMUST00000174955 77 ntBASIC15.05■□□□□ -0
Gm11127A7VMS2 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.05■□□□□ -0
Gm11127A7VMS2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Gm11127A7VMS2 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.05■□□□□ -0
Gm11127A7VMS2 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Gm11127A7VMS2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Gm11127A7VMS2 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm11127A7VMS2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm11127A7VMS2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm11127A7VMS2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms