Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
Gm3880A0A1B0GSB3 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Gm13216-201ENSMUST00000117145 591 ntBASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Gm3880A0A1B0GSB3 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Gm3880A0A1B0GSB3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Gm10676-201ENSMUST00000098778 3221 ntBASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC8.44□□□□□ -1.06
Gm3880A0A1B0GSB3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms