Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Gm38345-201ENSMUST00000192635 1748 ntBASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Igkv3-4A0A140T8Q4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Igkv3-4A0A140T8Q4 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Gm5421-201ENSMUST00000181698 2354 ntBASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Igkv3-4A0A140T8Q4 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Igkv3-4A0A140T8Q4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv3-4A0A140T8Q4 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv3-4A0A140T8Q4 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv3-4A0A140T8Q4 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Igkv3-4A0A140T8Q4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Igkv3-4A0A140T8Q4 Gm20628-201ENSMUST00000177363 3215 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms