Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm27463-201ENSMUST00000183569 57 ntBASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 AC159205.6-201ENSMUST00000224935 887 ntBASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav13n-1A0A0G2JEU8 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm13401-201ENSMUST00000117074 291 ntBASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm7889-201ENSMUST00000185591 958 ntBASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm13559-201ENSMUST00000120476 863 ntBASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav13n-1A0A0G2JEU8 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms