Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.01□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Gm10461-201ENSMUST00000202073 4786 ntBASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Gm6190-201ENSMUST00000220683 1374 ntBASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Gm7213-201ENSMUST00000215977 950 ntBASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 AC134329.2-201ENSMUST00000217897 428 ntBASIC14.97□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Gm18115-201ENSMUST00000221209 621 ntBASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC14.96□□□□□ -0.01
Trbv12-1A0A0B4J1H0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms