Protein–RNA interactions for Protein: A0A0A6YX19

Ighv6-4, Immunoglobulin heavy variable V6-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-4A0A0A6YX19 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.56□□□□□ -0.24
Ighv6-4A0A0A6YX19 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv6-4A0A0A6YX19 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv6-4A0A0A6YX19 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv6-4A0A0A6YX19 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv6-4A0A0A6YX19 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv6-4A0A0A6YX19 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv6-4A0A0A6YX19 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv6-4A0A0A6YX19 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ighv6-4A0A0A6YX19 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ighv6-4A0A0A6YX19 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Smad6-203ENSMUST00000179458 273 ntBASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Gm27801-201ENSMUST00000184174 223 ntBASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Mir7075-201ENSMUST00000184187 82 ntBASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ighv6-4A0A0A6YX19 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Gm12251-201ENSMUST00000117893 792 ntBASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Gm8493-201ENSMUST00000196881 489 ntBASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Ighv6-4A0A0A6YX19 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms