Protein–RNA interactions for Protein: A0A0A6YW39

Ighv16-1, Immunoglobulin heavy variable 16-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv16-1A0A0A6YW39 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv16-1A0A0A6YW39 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ighv16-1A0A0A6YW39 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ighv16-1A0A0A6YW39 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Gm16499-203ENSMUST00000204633 2177 ntBASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ighv16-1A0A0A6YW39 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv16-1A0A0A6YW39 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.71■□□□□ 0.1
Ighv16-1A0A0A6YW39 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv16-1A0A0A6YW39 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv16-1A0A0A6YW39 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv16-1A0A0A6YW39 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ighv16-1A0A0A6YW39 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Gm18959-201ENSMUST00000208954 655 ntBASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ighv16-1A0A0A6YW39 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ighv16-1A0A0A6YW39 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ighv16-1A0A0A6YW39 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ighv16-1A0A0A6YW39 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv16-1A0A0A6YW39 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv16-1A0A0A6YW39 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC15.68■□□□□ 0.1
Ighv16-1A0A0A6YW39 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ighv16-1A0A0A6YW39 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv16-1A0A0A6YW39 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ighv16-1A0A0A6YW39 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms