Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav6d-5A0A075B6B9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm44549-201ENSMUST00000208351 577 ntBASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
Trav6d-5A0A075B6B9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6d-5A0A075B6B9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Mir6349-201ENSMUST00000184059 97 ntBASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm7291-201ENSMUST00000199147 382 ntBASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6d-5A0A075B6B9 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Gm10493-201ENSMUST00000097270 612 ntBASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav6d-5A0A075B6B9 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms