Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gm26524-201ENSMUST00000192339 390 ntBASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Rab3c-203ENSMUST00000224180 967 ntBASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Tfap2a-209ENSMUST00000225180 1828 ntBASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.47□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav15d-1-dv6d-1A0A075B624 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms