Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Gm13534-201ENSMUST00000121169 513 ntBASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Gm43173-201ENSMUST00000202246 593 ntBASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trav7n-4A0A075B620 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Gm10418-201ENSMUST00000100943 576 ntBASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Gm13146-201ENSMUST00000118508 780 ntBASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Mir7075-201ENSMUST00000184187 82 ntBASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trav7n-4A0A075B620 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trav7n-4A0A075B620 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Gm43060-201ENSMUST00000200621 289 ntBASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Gm40848-201ENSMUST00000221998 324 ntBASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav7n-4A0A075B620 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.9□□□□□ -0.34
Trav7n-4A0A075B620 Tfap2a-209ENSMUST00000225180 1828 ntBASIC12.9□□□□□ -0.34
Trav7n-4A0A075B620 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7n-4A0A075B620 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7n-4A0A075B620 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7n-4A0A075B620 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7n-4A0A075B620 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7n-4A0A075B620 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7n-4A0A075B620 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7n-4A0A075B620 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav7n-4A0A075B620 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms