Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm29791-202ENSMUST00000207888 369 ntBASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav16d-dv11A0A075B617 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm16499-203ENSMUST00000204633 2177 ntBASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm26833-201ENSMUST00000180899 440 ntBASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav16d-dv11A0A075B617 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm13146-201ENSMUST00000118508 780 ntBASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm13534-201ENSMUST00000121169 513 ntBASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav16d-dv11A0A075B617 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 AC140930.3-201ENSMUST00000222935 274 ntBASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Gm11620-201ENSMUST00000118770 1845 ntBASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav16d-dv11A0A075B617 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms