Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trav4n-4A0A075B615 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Gm36858-201ENSMUST00000194501 2391 ntBASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trav4n-4A0A075B615 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Spcs1-204ENSMUST00000226782 949 ntBASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC11.84□□□□□ -0.51
Trav4n-4A0A075B615 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav4n-4A0A075B615 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav4n-4A0A075B615 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Gm43598-201ENSMUST00000202482 2479 ntBASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav4n-4A0A075B615 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms