Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.72□□□□□ -1.33
COPAP53621 AL359704.2-201ENST00000604335 521 ntBASIC6.72□□□□□ -1.33
COPAP53621 AC091768.1-201ENST00000609258 930 ntBASIC6.72□□□□□ -1.33
COPAP53621 AL589743.6-201ENST00000611025 117 ntBASIC6.72□□□□□ -1.33
COPAP53621 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.72□□□□□ -1.33
COPAP53621 AL356490.1-201ENST00000623079 479 ntBASIC6.72□□□□□ -1.33
COPAP53621 AC073593.1-201ENST00000624500 411 ntBASIC6.72□□□□□ -1.33
COPAP53621 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.72□□□□□ -1.33
COPAP53621 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.72□□□□□ -1.33
COPAP53621 AC010325.3-201ENST00000641084 394 ntBASIC6.72□□□□□ -1.33
COPAP53621 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
COPAP53621 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC6.72□□□□□ -1.33
COPAP53621 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.72□□□□□ -1.33
COPAP53621 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COPAP53621 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.72□□□□□ -1.33
COPAP53621 AC093909.5-201ENST00000621839 1799 ntBASIC6.72□□□□□ -1.33
COPAP53621 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.72□□□□□ -1.33
COPAP53621 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.72□□□□□ -1.33
COPAP53621 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
COPAP53621 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COPAP53621 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
COPAP53621 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
COPAP53621 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.71□□□□□ -1.33
COPAP53621 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.71□□□□□ -1.33
COPAP53621 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
COPAP53621 AC093278.2-201ENST00000564956 2485 ntBASIC6.71□□□□□ -1.33
COPAP53621 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COPAP53621 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COPAP53621 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
COPAP53621 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.71□□□□□ -1.34
COPAP53621 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
COPAP53621 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COPAP53621 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
COPAP53621 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.71□□□□□ -1.34
COPAP53621 SNORD35A-201ENST00000363389 86 ntBASIC6.71□□□□□ -1.34
COPAP53621 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.71□□□□□ -1.34
COPAP53621 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COPAP53621 MRPS6P2-201ENST00000381143 370 ntBASIC6.71□□□□□ -1.34
COPAP53621 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
COPAP53621 RNU4-64P-201ENST00000410795 131 ntBASIC6.71□□□□□ -1.34
COPAP53621 AC096537.2-201ENST00000413707 714 ntBASIC6.71□□□□□ -1.34
COPAP53621 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.71□□□□□ -1.34
COPAP53621 AC096644.3-201ENST00000416788 338 ntBASIC6.71□□□□□ -1.34
COPAP53621 AL360013.1-201ENST00000419031 858 ntBASIC6.71□□□□□ -1.34
COPAP53621 RCC2P2-201ENST00000422174 918 ntBASIC6.71□□□□□ -1.34
COPAP53621 RPS7P12-201ENST00000422385 582 ntBASIC6.71□□□□□ -1.34
COPAP53621 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.71□□□□□ -1.34
COPAP53621 AL445528.1-201ENST00000426330 420 ntBASIC6.71□□□□□ -1.34
COPAP53621 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COPAP53621 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.71□□□□□ -1.34
COPAP53621 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COPAP53621 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.71□□□□□ -1.34
COPAP53621 RPS27P20-201ENST00000492051 246 ntBASIC6.71□□□□□ -1.34
COPAP53621 AC122718.2-201ENST00000505325 591 ntBASIC6.71□□□□□ -1.34
COPAP53621 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.71□□□□□ -1.34
COPAP53621 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.71□□□□□ -1.34
COPAP53621 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.71□□□□□ -1.34
COPAP53621 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.71□□□□□ -1.34
COPAP53621 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COPAP53621 AL136520.1-202ENST00000555494 763 ntBASIC6.71□□□□□ -1.34
COPAP53621 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COPAP53621 MTND4LP25-201ENST00000570218 163 ntBASIC6.71□□□□□ -1.34
COPAP53621 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.71□□□□□ -1.34
COPAP53621 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC6.71□□□□□ -1.34
COPAP53621 AC091193.1-201ENST00000604640 448 ntBASIC6.71□□□□□ -1.34
COPAP53621 AC073111.2-201ENST00000605657 1075 ntBASIC6.71□□□□□ -1.34
COPAP53621 AC093635.1-201ENST00000609028 555 ntBASIC6.71□□□□□ -1.34
COPAP53621 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.71□□□□□ -1.34
COPAP53621 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.71□□□□□ -1.34
COPAP53621 AL356752.1-201ENST00000615844 593 ntBASIC6.71□□□□□ -1.34
COPAP53621 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.71□□□□□ -1.34
COPAP53621 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COPAP53621 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.71□□□□□ -1.34
COPAP53621 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COPAP53621 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COPAP53621 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COPAP53621 AL355377.1-201ENST00000621125 1653 ntBASIC6.71□□□□□ -1.34
COPAP53621 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.34
COPAP53621 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.7□□□□□ -1.34
COPAP53621 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
COPAP53621 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.7□□□□□ -1.34
COPAP53621 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COPAP53621 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
COPAP53621 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
COPAP53621 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.7□□□□□ -1.34
COPAP53621 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
COPAP53621 RNA5SP77-201ENST00000365394 120 ntBASIC6.7□□□□□ -1.34
COPAP53621 RNU1-84P-201ENST00000365447 164 ntBASIC6.7□□□□□ -1.34
COPAP53621 RNA5SP198-201ENST00000410376 127 ntBASIC6.7□□□□□ -1.34
COPAP53621 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC6.7□□□□□ -1.34
COPAP53621 AL590762.3-201ENST00000436372 640 ntBASIC6.7□□□□□ -1.34
COPAP53621 AL691517.1-201ENST00000440833 1235 ntBASIC6.7□□□□□ -1.34
COPAP53621 CRYGGP-201ENST00000443337 145 ntBASIC6.7□□□□□ -1.34
COPAP53621 RARRES2P3-201ENST00000457739 473 ntBASIC6.7□□□□□ -1.34
COPAP53621 CCNJP2-201ENST00000457810 1163 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms