Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
UPK1BO75841 ZNF132-203ENST00000639285 1200 ntTSL 5 BASIC5.17□□□□□ -1.58
UPK1BO75841 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.17□□□□□ -1.58
UPK1BO75841 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
UPK1BO75841 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
UPK1BO75841 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1BO75841 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
UPK1BO75841 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
UPK1BO75841 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1BO75841 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
UPK1BO75841 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
UPK1BO75841 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.17□□□□□ -1.58
UPK1BO75841 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.16□□□□□ -1.58
UPK1BO75841 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.16□□□□□ -1.58
UPK1BO75841 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 AC025574.1-201ENST00000554784 1653 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC023886.2-201ENST00000321285 411 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 OR9K1P-201ENST00000326513 941 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 MIR345-201ENST00000362114 98 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 RNU1-136P-201ENST00000384181 164 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 MIR197-201ENST00000384976 75 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 OR4F7P-201ENST00000402444 931 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 PSG11-203ENST00000403486 1163 ntTSL 2 BASIC5.16□□□□□ -1.58
UPK1BO75841 AL590635.1-201ENST00000406314 586 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC008937.2-201ENST00000415589 619 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1BO75841 MTND2P12-201ENST00000417560 1252 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 RNGTTP1-201ENST00000420965 728 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1BO75841 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1BO75841 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC079193.1-201ENST00000460497 588 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 AL603882.1-201ENST00000463059 681 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 AC008620.1-201ENST00000468453 592 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 RN7SL798P-201ENST00000468562 301 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1BO75841 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1BO75841 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.16□□□□□ -1.58
UPK1BO75841 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.16□□□□□ -1.58
UPK1BO75841 NMNAT1P5-201ENST00000559657 841 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 FAM192A-206ENST00000564108 1055 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
UPK1BO75841 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1BO75841 MIR3936-201ENST00000584304 110 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 AC119403.2-201ENST00000590960 598 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC005332.4-201ENST00000592752 579 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 AC073046.2-201ENST00000604756 527 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 AC141002.1-201ENST00000607025 279 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 AL080250.1-202ENST00000607221 915 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 AC244669.1-201ENST00000616141 715 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 AC027506.1-201ENST00000621395 198 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 AL353608.4-201ENST00000624487 1188 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 OR5AU1-204ENST00000641822 1197 ntBASIC5.16□□□□□ -1.58
UPK1BO75841 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
UPK1BO75841 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
UPK1BO75841 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.16□□□□□ -1.58
UPK1BO75841 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
UPK1BO75841 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.16□□□□□ -1.58
UPK1BO75841 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
UPK1BO75841 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.15□□□□□ -1.58
UPK1BO75841 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.15□□□□□ -1.58
UPK1BO75841 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.15□□□□□ -1.58
UPK1BO75841 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
UPK1BO75841 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
UPK1BO75841 OR2A3P-202ENST00000641249 1776 ntBASIC5.15□□□□□ -1.58
UPK1BO75841 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
UPK1BO75841 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
UPK1BO75841 RNU1-21P-201ENST00000363327 163 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1BO75841 MRPS6P2-201ENST00000381143 370 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 RNA5SP91-201ENST00000390902 119 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 RNA5SP176-201ENST00000390956 110 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 AC211486.3-201ENST00000412694 621 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC5.15□□□□□ -1.59
UPK1BO75841 MGAT2P2-201ENST00000427194 797 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC5.15□□□□□ -1.59
UPK1BO75841 AC096775.1-201ENST00000437724 448 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
UPK1BO75841 OR52I1-201ENST00000450052 1050 ntBASIC5.15□□□□□ -1.59
UPK1BO75841 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.15□□□□□ -1.59
UPK1BO75841 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms