Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX3O60493 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX3O60493 AC023968.1-201ENST00000560719 475 ntBASIC5.95□□□□□ -1.46
SNX3O60493 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX3O60493 BMS1P8-201ENST00000565049 1178 ntBASIC5.95□□□□□ -1.46
SNX3O60493 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX3O60493 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX3O60493 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX3O60493 AC141002.1-201ENST00000607025 279 ntBASIC5.95□□□□□ -1.46
SNX3O60493 AL121782.1-201ENST00000611242 413 ntBASIC5.95□□□□□ -1.46
SNX3O60493 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5.95□□□□□ -1.46
SNX3O60493 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX3O60493 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 OR4G1P-202ENST00000641173 1788 ntBASIC5.95□□□□□ -1.46
SNX3O60493 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX3O60493 AC011933.2-201ENST00000578539 2790 ntBASIC5.95□□□□□ -1.46
SNX3O60493 AC239868.2-201ENST00000564237 4527 ntBASIC5.95□□□□□ -1.46
SNX3O60493 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX3O60493 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SNX3O60493 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX3O60493 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX3O60493 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.94□□□□□ -1.46
SNX3O60493 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SNX3O60493 MAPK10-328ENST00000641553 4009 ntBASIC5.94□□□□□ -1.46
SNX3O60493 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX3O60493 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX3O60493 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX3O60493 RNA5SP140-201ENST00000364524 92 ntBASIC5.94□□□□□ -1.46
SNX3O60493 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX3O60493 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX3O60493 AL136231.1-201ENST00000429407 730 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX3O60493 NPM1P48-201ENST00000436002 853 ntBASIC5.94□□□□□ -1.46
SNX3O60493 OSTCP2-201ENST00000437956 444 ntBASIC5.94□□□□□ -1.46
SNX3O60493 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX3O60493 AL663074.2-201ENST00000440621 479 ntBASIC5.94□□□□□ -1.46
SNX3O60493 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AL121578.2-201ENST00000448797 447 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX3O60493 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX3O60493 RN7SL643P-201ENST00000471845 291 ntBASIC5.94□□□□□ -1.46
SNX3O60493 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SNX3O60493 SNX18P24-201ENST00000505249 671 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX3O60493 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
SNX3O60493 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.94□□□□□ -1.46
SNX3O60493 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AC022784.5-201ENST00000522241 437 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.94□□□□□ -1.46
SNX3O60493 LINC02284-201ENST00000558120 573 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX3O60493 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.94□□□□□ -1.46
SNX3O60493 AC119403.2-201ENST00000590960 598 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX3O60493 AC010615.3-201ENST00000597319 394 ntBASIC5.94□□□□□ -1.46
SNX3O60493 NDUFB9P1-201ENST00000604683 510 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AC114477.1-201ENST00000605097 605 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AL591167.1-201ENST00000607321 456 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AC127071.2-201ENST00000623293 527 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AP003400.2-201ENST00000624036 666 ntBASIC5.94□□□□□ -1.46
SNX3O60493 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.94□□□□□ -1.46
SNX3O60493 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SNX3O60493 AL591135.1-201ENST00000401578 5914 ntBASIC5.94□□□□□ -1.46
SNX3O60493 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SNX3O60493 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.94□□□□□ -1.46
SNX3O60493 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
SNX3O60493 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SNX3O60493 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SNX3O60493 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX3O60493 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.93□□□□□ -1.46
SNX3O60493 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SNX3O60493 AC002525.1-201ENST00000624392 1622 ntBASIC5.93□□□□□ -1.46
SNX3O60493 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.93□□□□□ -1.46
SNX3O60493 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX3O60493 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SNX3O60493 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX3O60493 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
SNX3O60493 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SNX3O60493 RPL12P23-201ENST00000405880 490 ntBASIC5.93□□□□□ -1.46
SNX3O60493 AL359633.1-201ENST00000421403 310 ntBASIC5.93□□□□□ -1.46
SNX3O60493 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.93□□□□□ -1.46
SNX3O60493 PUDPP2-201ENST00000431423 643 ntBASIC5.93□□□□□ -1.46
SNX3O60493 AL590399.4-201ENST00000436561 601 ntBASIC5.93□□□□□ -1.46
SNX3O60493 AC007790.1-201ENST00000439081 782 ntBASIC5.93□□□□□ -1.46
SNX3O60493 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX3O60493 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.93□□□□□ -1.46
SNX3O60493 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.93□□□□□ -1.46
SNX3O60493 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC5.93□□□□□ -1.46
SNX3O60493 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.93□□□□□ -1.46
SNX3O60493 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX3O60493 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.93□□□□□ -1.46
SNX3O60493 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.93□□□□□ -1.46
SNX3O60493 AC090424.1-201ENST00000535243 736 ntBASIC5.93□□□□□ -1.46
SNX3O60493 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.93□□□□□ -1.46
SNX3O60493 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.93□□□□□ -1.46
SNX3O60493 AC234775.3-201ENST00000564612 656 ntBASIC5.93□□□□□ -1.46
SNX3O60493 AC090241.1-201ENST00000587732 621 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms