Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.16□□□□□ -1.58
SDCBPO00560 RN7SL352P-201ENST00000466002 277 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.16□□□□□ -1.58
SDCBPO00560 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.16□□□□□ -1.58
SDCBPO00560 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.16□□□□□ -1.58
SDCBPO00560 RN7SL326P-201ENST00000477493 296 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 AC124945.1-201ENST00000485133 188 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 TPM3P3-201ENST00000521343 354 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 OR6M2P-201ENST00000529831 871 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.16□□□□□ -1.58
SDCBPO00560 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC5.16□□□□□ -1.58
SDCBPO00560 CCDC58P1-201ENST00000578567 430 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 AC093388.1-201ENST00000609166 430 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.16□□□□□ -1.58
SDCBPO00560 MIR6811-201ENST00000620409 58 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 AL137067.2-201ENST00000621202 131 ntBASIC5.16□□□□□ -1.58
SDCBPO00560 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC5.16□□□□□ -1.58
SDCBPO00560 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.16□□□□□ -1.58
SDCBPO00560 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC5.16□□□□□ -1.58
SDCBPO00560 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.16□□□□□ -1.58
SDCBPO00560 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.16□□□□□ -1.58
SDCBPO00560 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SDCBPO00560 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.15□□□□□ -1.58
SDCBPO00560 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.15□□□□□ -1.58
SDCBPO00560 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SDCBPO00560 AC024587.1-201ENST00000505925 2157 ntBASIC5.15□□□□□ -1.58
SDCBPO00560 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SDCBPO00560 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
SDCBPO00560 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.15□□□□□ -1.58
SDCBPO00560 AC079248.1-201ENST00000427568 1546 ntBASIC5.15□□□□□ -1.58
SDCBPO00560 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SDCBPO00560 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.15□□□□□ -1.59
SDCBPO00560 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.15□□□□□ -1.59
SDCBPO00560 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.15□□□□□ -1.59
SDCBPO00560 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
SDCBPO00560 OSTCP4-201ENST00000424397 449 ntBASIC5.15□□□□□ -1.59
SDCBPO00560 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.15□□□□□ -1.59
SDCBPO00560 AC128677.1-201ENST00000436016 442 ntBASIC5.15□□□□□ -1.59
SDCBPO00560 AC245291.3-201ENST00000443400 292 ntBASIC5.15□□□□□ -1.59
SDCBPO00560 AC092601.1-201ENST00000444526 383 ntBASIC5.15□□□□□ -1.59
SDCBPO00560 POU5F1P5-201ENST00000445059 658 ntBASIC5.15□□□□□ -1.59
SDCBPO00560 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.15□□□□□ -1.59
SDCBPO00560 RBMY2HP-201ENST00000457961 720 ntBASIC5.15□□□□□ -1.59
SDCBPO00560 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.15□□□□□ -1.59
SDCBPO00560 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC5.15□□□□□ -1.59
SDCBPO00560 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.15□□□□□ -1.59
SDCBPO00560 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SDCBPO00560 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.15□□□□□ -1.59
SDCBPO00560 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.15□□□□□ -1.59
SDCBPO00560 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.15□□□□□ -1.59
SDCBPO00560 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.15□□□□□ -1.59
SDCBPO00560 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.15□□□□□ -1.59
SDCBPO00560 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.15□□□□□ -1.59
SDCBPO00560 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.15□□□□□ -1.59
SDCBPO00560 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.15□□□□□ -1.59
SDCBPO00560 DYNLL1P1-201ENST00000595442 269 ntBASIC5.15□□□□□ -1.59
SDCBPO00560 AL589765.6-201ENST00000601909 549 ntBASIC5.15□□□□□ -1.59
SDCBPO00560 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.15□□□□□ -1.59
SDCBPO00560 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.15□□□□□ -1.59
SDCBPO00560 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SDCBPO00560 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.15□□□□□ -1.59
SDCBPO00560 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.15□□□□□ -1.59
SDCBPO00560 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.15□□□□□ -1.59
SDCBPO00560 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SDCBPO00560 SAMMSON-210ENST00000641260 1308 ntBASIC5.15□□□□□ -1.59
SDCBPO00560 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SDCBPO00560 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.15□□□□□ -1.59
SDCBPO00560 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
SDCBPO00560 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.15□□□□□ -1.59
SDCBPO00560 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.15□□□□□ -1.59
SDCBPO00560 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SDCBPO00560 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.15□□□□□ -1.59
SDCBPO00560 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
SDCBPO00560 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.14□□□□□ -1.59
SDCBPO00560 AP000432.2-201ENST00000624164 2048 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 AC140134.1-201ENST00000511830 3544 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
SDCBPO00560 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.14□□□□□ -1.59
SDCBPO00560 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
SDCBPO00560 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SDCBPO00560 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SDCBPO00560 RPL11P4-201ENST00000332269 436 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 SNORA64.3-201ENST00000365647 134 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 PRELID1P1-201ENST00000403549 660 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 RN7SKP17-201ENST00000411242 351 ntBASIC5.14□□□□□ -1.59
SDCBPO00560 DHFRP2-201ENST00000414224 547 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms