Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM1O00151 RPS4XP12-201ENST00000461747 709 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 RPS3AP49-201ENST00000472161 790 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.98□□□□□ -1.45
PDLIM1O00151 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
PDLIM1O00151 ST13P12-201ENST00000508958 1094 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC026774.2-201ENST00000513990 1098 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM1O00151 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.98□□□□□ -1.45
PDLIM1O00151 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
PDLIM1O00151 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC016252.1-201ENST00000609721 474 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC005899.6-201ENST00000620729 297 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 AC069234.4-201ENST00000621276 412 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
PDLIM1O00151 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM1O00151 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
PDLIM1O00151 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM1O00151 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 AC144833.1-201ENST00000567953 4089 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.98□□□□□ -1.45
PDLIM1O00151 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM1O00151 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
PDLIM1O00151 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PDLIM1O00151 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
PDLIM1O00151 RN7SKP74-201ENST00000362849 309 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 RNA5SP478-201ENST00000364657 115 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AC092634.1-201ENST00000366505 199 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.97□□□□□ -1.45
PDLIM1O00151 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PDLIM1O00151 UBBP1-201ENST00000392399 473 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 ARSFP1-201ENST00000398758 477 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AL590635.1-201ENST00000406314 586 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 UBE2V1P14-201ENST00000415815 558 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AP003385.1-201ENST00000426387 893 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.97□□□□□ -1.45
PDLIM1O00151 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.97□□□□□ -1.45
PDLIM1O00151 RPS10P18-201ENST00000442662 495 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.97□□□□□ -1.45
PDLIM1O00151 RBMY2BP-202ENST00000451071 1156 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 RPS27AP3-201ENST00000453803 454 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 RPL31P11-202ENST00000454082 372 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.97□□□□□ -1.45
PDLIM1O00151 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AC091849.1-201ENST00000509920 121 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 MINOS1P4-201ENST00000515470 318 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 IGKV2D-38-201ENST00000518423 240 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AC131935.1-201ENST00000524621 333 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 SNRPCP6-201ENST00000528310 210 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AC007068.2-201ENST00000543168 395 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AL162632.2-201ENST00000553933 399 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AL445383.1-201ENST00000554689 874 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.97□□□□□ -1.45
PDLIM1O00151 PPIAP14-201ENST00000577627 496 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.97□□□□□ -1.45
PDLIM1O00151 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AL021368.3-201ENST00000607119 578 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AC006328.2-201ENST00000623198 397 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AC012005.2-201ENST00000624333 397 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AC061999.1-201ENST00000624454 177 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AC005858.3-201ENST00000624756 589 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.97□□□□□ -1.45
PDLIM1O00151 AC073869.7-201ENST00000640874 297 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 AC079248.1-201ENST00000427568 1546 ntBASIC5.97□□□□□ -1.45
PDLIM1O00151 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PDLIM1O00151 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms