Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MMP13P45452 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.54□□□□□ -1.36
MMP13P45452 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
MMP13P45452 AL353743.3-201ENST00000442109 1468 ntBASIC6.53□□□□□ -1.36
MMP13P45452 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
MMP13P45452 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.53□□□□□ -1.36
MMP13P45452 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 AC125238.2-201ENST00000430003 1440 ntBASIC6.53□□□□□ -1.36
MMP13P45452 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MMP13P45452 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 RN7SKP184-201ENST00000362348 333 ntBASIC6.53□□□□□ -1.36
MMP13P45452 SNORD16-201ENST00000362803 99 ntBASIC6.53□□□□□ -1.36
MMP13P45452 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 U3.43-201ENST00000410734 213 ntBASIC6.53□□□□□ -1.36
MMP13P45452 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.53□□□□□ -1.36
MMP13P45452 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.53□□□□□ -1.36
MMP13P45452 GTF3AP6-201ENST00000432585 986 ntBASIC6.53□□□□□ -1.36
MMP13P45452 RPL12P49-201ENST00000441100 121 ntBASIC6.53□□□□□ -1.36
MMP13P45452 AC079922.1-201ENST00000443291 359 ntBASIC6.53□□□□□ -1.36
MMP13P45452 AC073476.1-201ENST00000452854 407 ntBASIC6.53□□□□□ -1.36
MMP13P45452 AC099670.1-201ENST00000455141 783 ntBASIC6.53□□□□□ -1.36
MMP13P45452 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 snoU13.29-201ENST00000459370 104 ntBASIC6.53□□□□□ -1.36
MMP13P45452 AC004890.1-201ENST00000461005 181 ntBASIC6.53□□□□□ -1.36
MMP13P45452 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
MMP13P45452 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.53□□□□□ -1.36
MMP13P45452 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.53□□□□□ -1.36
MMP13P45452 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.53□□□□□ -1.36
MMP13P45452 AC106800.3-201ENST00000511389 308 ntBASIC6.53□□□□□ -1.36
MMP13P45452 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 TPRX1P1-201ENST00000557620 319 ntBASIC6.53□□□□□ -1.36
MMP13P45452 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 SETP3-201ENST00000581726 813 ntBASIC6.53□□□□□ -1.36
MMP13P45452 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 AC073046.2-201ENST00000604756 527 ntBASIC6.53□□□□□ -1.36
MMP13P45452 AC048344.4-201ENST00000619744 527 ntBASIC6.53□□□□□ -1.36
MMP13P45452 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.53□□□□□ -1.36
MMP13P45452 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
MMP13P45452 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.53□□□□□ -1.36
MMP13P45452 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
MMP13P45452 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
MMP13P45452 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP13P45452 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP13P45452 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MMP13P45452 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
MMP13P45452 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP13P45452 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MMP13P45452 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.52□□□□□ -1.37
MMP13P45452 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
MMP13P45452 RN7SKP77-201ENST00000363261 353 ntBASIC6.52□□□□□ -1.37
MMP13P45452 RNA5SP485-201ENST00000365053 119 ntBASIC6.52□□□□□ -1.37
MMP13P45452 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP13P45452 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MMP13P45452 AL360013.1-201ENST00000419031 858 ntBASIC6.52□□□□□ -1.37
MMP13P45452 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP13P45452 Z82198.3-201ENST00000421145 199 ntBASIC6.52□□□□□ -1.37
MMP13P45452 SETP10-201ENST00000424368 814 ntBASIC6.52□□□□□ -1.37
MMP13P45452 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
MMP13P45452 AL390879.1-201ENST00000439143 386 ntBASIC6.52□□□□□ -1.37
MMP13P45452 AC234771.2-201ENST00000445718 597 ntBASIC6.52□□□□□ -1.37
MMP13P45452 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.52□□□□□ -1.37
MMP13P45452 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP13P45452 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.52□□□□□ -1.37
MMP13P45452 AL035690.1-201ENST00000490892 383 ntBASIC6.52□□□□□ -1.37
MMP13P45452 RN7SL612P-201ENST00000497704 295 ntBASIC6.52□□□□□ -1.37
MMP13P45452 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.52□□□□□ -1.37
MMP13P45452 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
MMP13P45452 AC112206.4-201ENST00000515142 405 ntBASIC6.52□□□□□ -1.37
MMP13P45452 RNA5SP418-201ENST00000515951 117 ntBASIC6.52□□□□□ -1.37
MMP13P45452 COX6B1P4-201ENST00000519826 484 ntBASIC6.52□□□□□ -1.37
MMP13P45452 AC135983.3-201ENST00000528049 1226 ntBASIC6.52□□□□□ -1.37
MMP13P45452 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
MMP13P45452 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP13P45452 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.52□□□□□ -1.37
MMP13P45452 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.52□□□□□ -1.37
MMP13P45452 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms