Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 IGLV3-19-201ENST00000390309 377 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 EIF4A1P8-201ENST00000394444 1190 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC092952.1-201ENST00000397646 1209 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 FTH1P26-201ENST00000406512 701 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AL136100.1-201ENST00000407696 330 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 MIR1227-201ENST00000408484 88 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 ANKRD7-202ENST00000417525 1242 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 CHCHD3P1-201ENST00000425516 676 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 RPL7AP49-201ENST00000429522 581 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AL591438.1-201ENST00000433508 581 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AL117338.1-201ENST00000434552 631 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC012501.2-201ENST00000437634 1281 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 RPS29P5-201ENST00000452777 171 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 PABPC1P10-201ENST00000464731 381 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 OR9A1P-202ENST00000484361 945 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 CCDC11P1-201ENST00000503137 1162 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC106795.1-207ENST00000507037 1123 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC010343.2-201ENST00000510162 224 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 RN7SKP190-201ENST00000516079 286 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 IGLV3-13-201ENST00000518475 223 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC092709.1-201ENST00000521355 1045 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 OR9G3P-201ENST00000525553 918 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC079064.1-201ENST00000528365 362 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC018552.1-201ENST00000562099 811 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC026458.1-201ENST00000564330 438 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC136944.5-201ENST00000573021 151 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 RN7SL378P-201ENST00000582657 298 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC096553.1-201ENST00000605169 829 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC097505.1-201ENST00000610199 565 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AL117372.1-201ENST00000613711 459 ntTSL 4 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 Metazoa_SRP.39-201ENST00000614194 271 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AL023881.1-201ENST00000621088 301 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC067931.1-201ENST00000624190 671 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 RANBP2-205ENST00000629728 156 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 RDM1-229ENST00000639942 420 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 SAGE3P-201ENST00000619800 1635 ntBASIC3.01□□□□□ -1.93
LINC01558Q9Y6Z2 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 TRIM51FP-201ENST00000526452 1353 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 ERMARD-205ENST00000418781 1841 ntTSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 UPP2-201ENST00000005756 2224 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 CA1-225ENST00000626824 2405 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 GNL2P1-201ENST00000451274 2190 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 OR1L6-202ENST00000373684 1044 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 ARSFP1-201ENST00000398758 477 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 TTLL11-IT1-201ENST00000411790 1052 ntTSL 1 (best) BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 ATG4AP1-201ENST00000416893 538 ntBASIC3□□□□□ -1.93
LINC01558Q9Y6Z2 AL359092.1-201ENST00000417156 265 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms