Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 RPL23AP96-201ENST00000514593 591 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AC022634.1-201ENST00000520765 532 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 IGKV3-25-201ENST00000523155 253 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AC027544.3-201ENST00000535082 757 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 BANF2-205ENST00000545418 360 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 NIFKP8-201ENST00000560500 874 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AP006545.1-201ENST00000563059 911 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 FRG2DP-202ENST00000566967 323 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 ATP5F1P7-201ENST00000567330 760 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 RN7SL138P-201ENST00000577405 287 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 LINC01444-202ENST00000581211 654 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 MIR3682-201ENST00000581338 84 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AC024619.3-201ENST00000582196 323 ntTSL 2 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 RPIAP1-201ENST00000587900 742 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AL355989.2-201ENST00000603304 512 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AL139351.1-201ENST00000622092 320 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AL356585.4-201ENST00000623078 1229 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AC092329.4-205ENST00000638822 574 ntTSL 3 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 FAM238C-205ENST00000640641 391 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 NVL-212ENST00000469968 2510 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 CYP4A11-204ENST00000462347 1775 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 AC099753.1-201ENST00000634947 2118 ntTSL 5 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 CDY15P-201ENST00000421995 1570 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 CDY22P-201ENST00000451423 1554 ntBASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 FBXO38-203ENST00000394370 4132 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC8.6□□□□□ -1.03
VPS9D1Q9Y2B5 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 HERC2P8-202ENST00000564334 3705 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 IL22RA2-201ENST00000296980 2886 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 MAP3K8-202ENST00000375321 2518 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 ALDH7A1-227ENST00000636879 2501 ntTSL 5 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 C2orf42-205ENST00000420306 2193 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 MCC-209ENST00000515367 3844 ntTSL 5 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 NUDT13-201ENST00000349051 1835 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AC048380.2-201ENST00000624725 3548 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 Y_RNA.231-201ENST00000364358 102 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 RNY4P34-201ENST00000364779 95 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AC117470.1-201ENST00000381974 330 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 RN7SKP154-201ENST00000410136 290 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 RNU6-575P-201ENST00000411326 105 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 GAPDHP51-201ENST00000426454 1000 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 DSTNP5-201ENST00000427921 523 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 SEPT7P5-201ENST00000434048 306 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 RPL23AP50-201ENST00000434149 455 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 IFNA20P-201ENST00000436840 528 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 YAE1D1-203ENST00000448268 425 ntTSL 2 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 MEMO1P4-201ENST00000453590 386 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 MTATP8P1-201ENST00000467115 207 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 RN7SL659P-201ENST00000483093 299 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 MTND6P17-201ENST00000511811 519 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 RN7SKP256-201ENST00000517201 314 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AC023050.3-201ENST00000541142 333 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AL137100.2-201ENST00000555786 315 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AC007907.1-201ENST00000557953 451 ntTSL 3 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AC068714.1-201ENST00000559623 800 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 LINC01927-201ENST00000582231 712 ntTSL 3 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AL390838.2-201ENST00000602394 274 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 TRMT112P7-201ENST00000603133 367 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AL133351.4-201ENST00000604204 631 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AC093913.1-201ENST00000614178 329 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 PISRT1-201ENST00000626175 531 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 NOLC1-202ENST00000405356 3967 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 AASS-203ENST00000417368 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 ELAVL4-201ENST00000357083 1442 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 VN2R3P-201ENST00000422626 1412 ntBASIC8.59□□□□□ -1.03
VPS9D1Q9Y2B5 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms