Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.21□□□□□ -1.25
GABPAQ06546 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.21□□□□□ -1.25
GABPAQ06546 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
GABPAQ06546 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
GABPAQ06546 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
GABPAQ06546 TMSB4XP2-201ENST00000335179 210 ntBASIC7.21□□□□□ -1.26
GABPAQ06546 RNA5SP333-201ENST00000363466 118 ntBASIC7.21□□□□□ -1.26
GABPAQ06546 RNA5SP334-201ENST00000364825 118 ntBASIC7.21□□□□□ -1.26
GABPAQ06546 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
GABPAQ06546 CAV1-204ENST00000393470 598 ntTSL 4 BASIC7.21□□□□□ -1.26
GABPAQ06546 CDY17P-201ENST00000414121 1282 ntBASIC7.21□□□□□ -1.26
GABPAQ06546 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC7.21□□□□□ -1.26
GABPAQ06546 NDUFS5P5-201ENST00000437256 321 ntBASIC7.21□□□□□ -1.26
GABPAQ06546 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.21□□□□□ -1.26
GABPAQ06546 AL022237.1-201ENST00000446663 358 ntBASIC7.21□□□□□ -1.26
GABPAQ06546 AL445466.1-201ENST00000448432 357 ntBASIC7.21□□□□□ -1.26
GABPAQ06546 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
GABPAQ06546 RN7SL269P-201ENST00000467795 305 ntBASIC7.21□□□□□ -1.26
GABPAQ06546 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.21□□□□□ -1.26
GABPAQ06546 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC7.21□□□□□ -1.26
GABPAQ06546 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC7.21□□□□□ -1.26
GABPAQ06546 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC7.21□□□□□ -1.26
GABPAQ06546 TCL6_3.1-201ENST00000619064 137 ntBASIC7.21□□□□□ -1.26
GABPAQ06546 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
GABPAQ06546 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
GABPAQ06546 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
GABPAQ06546 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
GABPAQ06546 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
GABPAQ06546 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
GABPAQ06546 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC7.21□□□□□ -1.26
GABPAQ06546 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC7.21□□□□□ -1.26
GABPAQ06546 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
GABPAQ06546 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
GABPAQ06546 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
GABPAQ06546 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
GABPAQ06546 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
GABPAQ06546 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.2□□□□□ -1.26
GABPAQ06546 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
GABPAQ06546 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.2□□□□□ -1.26
GABPAQ06546 AL031651.1-201ENST00000615357 1438 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 LCOR-201ENST00000286067 4542 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.2□□□□□ -1.26
GABPAQ06546 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
GABPAQ06546 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.2□□□□□ -1.26
GABPAQ06546 AL391261.1-201ENST00000555712 1479 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
GABPAQ06546 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
GABPAQ06546 RNU105B-201ENST00000364478 208 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
GABPAQ06546 RN7SKP161-201ENST00000411110 305 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.2□□□□□ -1.26
GABPAQ06546 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC7.2□□□□□ -1.26
GABPAQ06546 AC104843.2-201ENST00000427666 297 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 AL451136.1-201ENST00000435399 325 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC7.2□□□□□ -1.26
GABPAQ06546 GEMIN2P1-201ENST00000454246 752 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.2□□□□□ -1.26
GABPAQ06546 AC073594.1-201ENST00000462065 364 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 AC092865.4-201ENST00000477936 615 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 RNA5SP400-201ENST00000517155 111 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC7.2□□□□□ -1.26
GABPAQ06546 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.2□□□□□ -1.26
GABPAQ06546 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.2□□□□□ -1.26
GABPAQ06546 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC7.2□□□□□ -1.26
GABPAQ06546 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.2□□□□□ -1.26
GABPAQ06546 AC024589.2-201ENST00000605642 1294 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 AL021368.3-201ENST00000607119 578 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 MIR6862-1-201ENST00000613016 70 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 MIR6862-2-201ENST00000614755 70 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 AL512356.3-201ENST00000623005 461 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
GABPAQ06546 AC096921.2-201ENST00000561507 1916 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC7.2□□□□□ -1.26
GABPAQ06546 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
GABPAQ06546 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
GABPAQ06546 AC011369.2-201ENST00000624423 1567 ntBASIC7.2□□□□□ -1.26
GABPAQ06546 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.2□□□□□ -1.26
GABPAQ06546 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
GABPAQ06546 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
GABPAQ06546 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
GABPAQ06546 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
GABPAQ06546 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC7.19□□□□□ -1.26
GABPAQ06546 AC022819.1-201ENST00000563495 3910 ntBASIC7.19□□□□□ -1.26
GABPAQ06546 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC7.19□□□□□ -1.26
GABPAQ06546 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
GABPAQ06546 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
GABPAQ06546 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
GABPAQ06546 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.19□□□□□ -1.26
GABPAQ06546 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
GABPAQ06546 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
GABPAQ06546 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
GABPAQ06546 AC023490.2-201ENST00000359859 470 ntBASIC7.19□□□□□ -1.26
GABPAQ06546 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
GABPAQ06546 MIR1203-201ENST00000408812 85 ntBASIC7.19□□□□□ -1.26
GABPAQ06546 BX284632.2-201ENST00000421091 399 ntBASIC7.19□□□□□ -1.26
GABPAQ06546 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.19□□□□□ -1.26
GABPAQ06546 RPL23AP19-201ENST00000436229 369 ntBASIC7.19□□□□□ -1.26
GABPAQ06546 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.19□□□□□ -1.26
GABPAQ06546 AL512605.1-202ENST00000441919 381 ntBASIC7.19□□□□□ -1.26
GABPAQ06546 AL359955.2-201ENST00000445380 353 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 209.5 ms