Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 NDUFB9P1-201ENST00000604683 510 ntBASIC5.92□□□□□ -1.46
HMGCS1Q01581 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.92□□□□□ -1.46
HMGCS1Q01581 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.92□□□□□ -1.46
HMGCS1Q01581 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
HMGCS1Q01581 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS1Q01581 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS1Q01581 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS1Q01581 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS1Q01581 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 RNA5SP375-201ENST00000362975 119 ntBASIC5.91□□□□□ -1.46
HMGCS1Q01581 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.91□□□□□ -1.46
HMGCS1Q01581 RPL23AP17-201ENST00000401064 499 ntBASIC5.91□□□□□ -1.46
HMGCS1Q01581 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 AL731534.1-201ENST00000434711 269 ntBASIC5.91□□□□□ -1.46
HMGCS1Q01581 ARMC4P1-201ENST00000438905 707 ntBASIC5.91□□□□□ -1.46
HMGCS1Q01581 POU5F1P5-201ENST00000445059 658 ntBASIC5.91□□□□□ -1.46
HMGCS1Q01581 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 AC044810.1-201ENST00000480271 711 ntBASIC5.91□□□□□ -1.46
HMGCS1Q01581 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 RN7SKP67-201ENST00000515905 235 ntBASIC5.91□□□□□ -1.46
HMGCS1Q01581 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS1Q01581 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 AC012368.3-201ENST00000604190 219 ntBASIC5.91□□□□□ -1.46
HMGCS1Q01581 SNORA74.4-201ENST00000607595 199 ntBASIC5.91□□□□□ -1.46
HMGCS1Q01581 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS1Q01581 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 EIF3EP1-201ENST00000433978 1316 ntBASIC5.91□□□□□ -1.46
HMGCS1Q01581 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS1Q01581 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS1Q01581 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
HMGCS1Q01581 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS1Q01581 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGCS1Q01581 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMGCS1Q01581 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMGCS1Q01581 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HMGCS1Q01581 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMGCS1Q01581 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.9□□□□□ -1.46
HMGCS1Q01581 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGCS1Q01581 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGCS1Q01581 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMGCS1Q01581 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
HMGCS1Q01581 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HMGCS1Q01581 RPS26P38-201ENST00000414476 348 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 RPL23AP18-201ENST00000416139 468 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGCS1Q01581 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGCS1Q01581 AC094019.1-201ENST00000434678 472 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 LINC00328-2P-201ENST00000436585 219 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGCS1Q01581 HIGD1AP16-201ENST00000450986 258 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 RAB28P2-201ENST00000454299 641 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 RN7SL104P-201ENST00000498686 293 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGCS1Q01581 AC092349.1-201ENST00000504903 310 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 KHDC1P1-201ENST00000511053 508 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 CYP4F27P-201ENST00000514557 494 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 AC116917.1-201ENST00000520558 305 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 AC008429.4-201ENST00000521201 182 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 TPM3P3-201ENST00000521343 354 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.9□□□□□ -1.46
HMGCS1Q01581 AP001000.1-201ENST00000526843 742 ntBASIC5.9□□□□□ -1.46
HMGCS1Q01581 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
HMGCS1Q01581 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGCS1Q01581 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.9□□□□□ -1.46
HMGCS1Q01581 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms