Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH12P55289 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 OR4G1P-202ENST00000641173 1788 ntBASIC5.89□□□□□ -1.47
CDH12P55289 FUNDC2P3-201ENST00000334716 533 ntBASIC5.89□□□□□ -1.47
CDH12P55289 Y_RNA.62-201ENST00000362840 99 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AC074375.1-201ENST00000372993 192 ntBASIC5.89□□□□□ -1.47
CDH12P55289 MRPS6P2-201ENST00000381143 370 ntBASIC5.89□□□□□ -1.47
CDH12P55289 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
CDH12P55289 MIR27A-201ENST00000385073 78 ntBASIC5.89□□□□□ -1.47
CDH12P55289 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.89□□□□□ -1.47
CDH12P55289 RPL12P23-201ENST00000405880 490 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AL139039.2-201ENST00000407436 479 ntBASIC5.89□□□□□ -1.47
CDH12P55289 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH12P55289 AL357078.2-201ENST00000416486 427 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AC007562.1-201ENST00000421819 517 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH12P55289 PTPN2P1-201ENST00000423212 1072 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH12P55289 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.89□□□□□ -1.47
CDH12P55289 AC023274.2-201ENST00000445264 521 ntBASIC5.89□□□□□ -1.47
CDH12P55289 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 CCNJP1-201ENST00000450600 1149 ntBASIC5.89□□□□□ -1.47
CDH12P55289 OR52Y1P-201ENST00000452418 828 ntBASIC5.89□□□□□ -1.47
CDH12P55289 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH12P55289 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH12P55289 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AL354872.1-201ENST00000456361 967 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH12P55289 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH12P55289 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH12P55289 OR10D4P-201ENST00000525892 951 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
CDH12P55289 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH12P55289 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 AC005519.1-201ENST00000554490 601 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH12P55289 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.89□□□□□ -1.47
CDH12P55289 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH12P55289 AC009120.3-201ENST00000563335 499 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH12P55289 RPL29P33-201ENST00000587474 316 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.89□□□□□ -1.47
CDH12P55289 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.89□□□□□ -1.47
CDH12P55289 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.89□□□□□ -1.47
CDH12P55289 AL512430.4-201ENST00000603085 613 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AC019257.2-201ENST00000605539 497 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AL021368.3-201ENST00000607119 578 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AL008723.3-201ENST00000608926 449 ntBASIC5.89□□□□□ -1.47
CDH12P55289 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH12P55289 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.89□□□□□ -1.47
CDH12P55289 AC027506.1-201ENST00000621395 198 ntBASIC5.89□□□□□ -1.47
CDH12P55289 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
CDH12P55289 AC106858.1-201ENST00000637497 429 ntBASIC5.89□□□□□ -1.47
CDH12P55289 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH12P55289 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH12P55289 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH12P55289 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
CDH12P55289 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.89□□□□□ -1.47
CDH12P55289 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CDH12P55289 AC092724.1-201ENST00000624623 3397 ntBASIC5.89□□□□□ -1.47
CDH12P55289 DNM1P47-203ENST00000571780 12667 ntBASIC5.89□□□□□ -1.47
CDH12P55289 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
CDH12P55289 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
CDH12P55289 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CDH12P55289 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH12P55289 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
CDH12P55289 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CDH12P55289 OR7A2P-201ENST00000304105 930 ntBASIC5.88□□□□□ -1.47
CDH12P55289 AL353133.1-201ENST00000407695 401 ntBASIC5.88□□□□□ -1.47
CDH12P55289 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.88□□□□□ -1.47
CDH12P55289 CDC42P6-201ENST00000421246 576 ntBASIC5.88□□□□□ -1.47
CDH12P55289 AC002127.1-201ENST00000421305 225 ntBASIC5.88□□□□□ -1.47
CDH12P55289 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH12P55289 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH12P55289 AL691517.1-201ENST00000440833 1235 ntBASIC5.88□□□□□ -1.47
CDH12P55289 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH12P55289 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.88□□□□□ -1.47
CDH12P55289 RPL31P53-201ENST00000457065 348 ntBASIC5.88□□□□□ -1.47
CDH12P55289 AKR1D1P1-201ENST00000457236 936 ntBASIC5.88□□□□□ -1.47
CDH12P55289 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH12P55289 AC008628.1-201ENST00000508663 265 ntBASIC5.88□□□□□ -1.47
CDH12P55289 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.88□□□□□ -1.47
CDH12P55289 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH12P55289 SUMO2P19-201ENST00000518920 295 ntBASIC5.88□□□□□ -1.47
CDH12P55289 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH12P55289 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.88□□□□□ -1.47
CDH12P55289 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.88□□□□□ -1.47
CDH12P55289 AC089984.3-201ENST00000552838 363 ntBASIC5.88□□□□□ -1.47
CDH12P55289 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
CDH12P55289 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms