Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC4.7□□□□□ -1.66
CXCL1P09341 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCL1P09341 MIR4433B-201ENST00000581329 102 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCL1P09341 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCL1P09341 AC245052.7-201ENST00000601161 359 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC4.7□□□□□ -1.66
CXCL1P09341 AC012510.1-201ENST00000607946 759 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 SAGE3P-201ENST00000619800 1635 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC4.7□□□□□ -1.66
CXCL1P09341 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 EEF1A1P28-201ENST00000450915 1403 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CXCL1P09341 AL158152.1-201ENST00000602652 1435 ntBASIC4.7□□□□□ -1.66
CXCL1P09341 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
CXCL1P09341 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CXCL1P09341 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC4.7□□□□□ -1.66
CXCL1P09341 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
CXCL1P09341 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CXCL1P09341 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.69□□□□□ -1.66
CXCL1P09341 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.69□□□□□ -1.66
CXCL1P09341 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CXCL1P09341 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
CXCL1P09341 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CXCL1P09341 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CXCL1P09341 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC4.69□□□□□ -1.66
CXCL1P09341 TOMM7-202ENST00000372879 514 ntTSL 4 BASIC4.69□□□□□ -1.66
CXCL1P09341 SNORA70.6-201ENST00000383934 134 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 FDPSP5-201ENST00000399474 1057 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC4.69□□□□□ -1.66
CXCL1P09341 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC4.69□□□□□ -1.66
CXCL1P09341 HYALP1-201ENST00000417674 1279 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 AL121983.2-201ENST00000426899 688 ntTSL 3 BASIC4.69□□□□□ -1.66
CXCL1P09341 AC114402.2-201ENST00000432760 643 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 RPS21P1-201ENST00000434479 247 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC4.69□□□□□ -1.66
CXCL1P09341 AC096632.2-201ENST00000438139 1239 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 GAPDHP33-201ENST00000443168 1013 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 AL022068.1-208ENST00000447250 1016 ntTSL 2 BASIC4.69□□□□□ -1.66
CXCL1P09341 AC005517.1-201ENST00000452091 489 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 RPL12P39-201ENST00000455456 496 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 PDCL3P4-201ENST00000489621 720 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC4.69□□□□□ -1.66
CXCL1P09341 RPL5P14-201ENST00000494197 878 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC4.69□□□□□ -1.66
CXCL1P09341 CASC11-203ENST00000519071 791 ntTSL 3 BASIC4.69□□□□□ -1.66
CXCL1P09341 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC4.69□□□□□ -1.66
CXCL1P09341 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC4.69□□□□□ -1.66
CXCL1P09341 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC4.69□□□□□ -1.66
CXCL1P09341 RPA2P3-201ENST00000533268 770 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC4.69□□□□□ -1.66
CXCL1P09341 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC4.69□□□□□ -1.66
CXCL1P09341 AC126615.2-201ENST00000553003 515 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 AC090616.1-201ENST00000583895 447 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 MIR5682-201ENST00000584864 76 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC4.69□□□□□ -1.66
CXCL1P09341 MIR6133-201ENST00000617057 108 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
CXCL1P09341 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.69□□□□□ -1.66
CXCL1P09341 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 EEF1A1P16-201ENST00000325349 1414 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
CXCL1P09341 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 AC093849.1-201ENST00000563631 2209 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 AC011933.2-201ENST00000578539 2790 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CXCL1P09341 THAP12P5-201ENST00000405864 2275 ntBASIC4.69□□□□□ -1.66
CXCL1P09341 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
CXCL1P09341 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL1P09341 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL1P09341 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL1P09341 AC073136.1-201ENST00000449426 2884 ntBASIC4.68□□□□□ -1.66
CXCL1P09341 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL1P09341 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL1P09341 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL1P09341 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.68□□□□□ -1.66
CXCL1P09341 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC4.68□□□□□ -1.66
CXCL1P09341 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CXCL1P09341 WFDC10B-202ENST00000335769 475 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
CXCL1P09341 RN7SKP1-201ENST00000365525 307 ntBASIC4.68□□□□□ -1.66
CXCL1P09341 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC4.68□□□□□ -1.66
CXCL1P09341 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms