Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP003476.1-201ENST00000623984 516 ntBASIC6.23□□□□□ -1.41
AMBRA1Q9C0C7 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC6.23□□□□□ -1.41
AMBRA1Q9C0C7 AC006213.6-201ENST00000623722 4179 ntBASIC6.23□□□□□ -1.41
AMBRA1Q9C0C7 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
AMBRA1Q9C0C7 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.23□□□□□ -1.41
AMBRA1Q9C0C7 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
AMBRA1Q9C0C7 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
AMBRA1Q9C0C7 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
AMBRA1Q9C0C7 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
AMBRA1Q9C0C7 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
AMBRA1Q9C0C7 ZNF780A-203ENST00000450241 7500 ntTSL 2 BASIC6.23□□□□□ -1.41
AMBRA1Q9C0C7 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC110373.1-201ENST00000505994 3505 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 MTCO1P25-201ENST00000414449 1799 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 OR11H13P-201ENST00000359695 979 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 RNA5SP115-201ENST00000411160 107 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC007568.1-201ENST00000422912 471 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AL139415.1-201ENST00000424862 352 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC092447.3-201ENST00000426027 686 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 HMGB3P5-201ENST00000428894 612 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 NPM1P25-201ENST00000429734 854 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 BMS1P11-201ENST00000442351 885 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 XKRY2-201ENST00000442362 1093 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AL355355.1-201ENST00000442900 793 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 BMS1P9-201ENST00000457640 885 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 RNU7-157P-201ENST00000459600 66 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC090543.1-201ENST00000492168 485 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 Y_RNA.717-201ENST00000517106 92 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 SEC11B-201ENST00000518383 499 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 IGLV3-6-201ENST00000523937 250 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 C1DP5-201ENST00000525775 383 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 OR52K3P-201ENST00000531655 943 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC089984.3-201ENST00000552838 363 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC005632.2-201ENST00000564271 828 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC026458.1-201ENST00000564330 438 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 SETP3-201ENST00000581726 813 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC008507.2-201ENST00000588402 1176 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC004223.2-201ENST00000590309 544 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AP000864.1-201ENST00000609424 650 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 MIR6780B-201ENST00000610307 79 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC245389.2-201ENST00000616023 576 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC242843.1-201ENST00000618702 573 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC012629.3-201ENST00000623397 328 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC079298.2-201ENST00000623885 459 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC013437.2-201ENST00000639587 677 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 DLEU2L-201ENST00000371086 3555 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 PHLDB2-211ENST00000481953 5474 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 IMMTP1-201ENST00000435590 2219 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 MELK-211ENST00000545008 2236 ntTSL 2 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AL645568.2-201ENST00000432815 1337 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 AC005332.9-201ENST00000620266 2921 ntBASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
AMBRA1Q9C0C7 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
AMBRA1Q9C0C7 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
AMBRA1Q9C0C7 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
AMBRA1Q9C0C7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.21□□□□□ -1.41
AMBRA1Q9C0C7 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms