Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.39□□□□□ -1.55
ACTBP60709 OR7E19P-202ENST00000589942 844 ntBASIC5.39□□□□□ -1.55
ACTBP60709 AC004890.3-201ENST00000605566 1095 ntBASIC5.39□□□□□ -1.55
ACTBP60709 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.39□□□□□ -1.55
ACTBP60709 MIR7854-201ENST00000620068 65 ntBASIC5.39□□□□□ -1.55
ACTBP60709 AC006328.2-201ENST00000623198 397 ntBASIC5.39□□□□□ -1.55
ACTBP60709 AC012005.2-201ENST00000624333 397 ntBASIC5.39□□□□□ -1.55
ACTBP60709 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.39□□□□□ -1.55
ACTBP60709 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.39□□□□□ -1.55
ACTBP60709 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ACTBP60709 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.39□□□□□ -1.55
ACTBP60709 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
ACTBP60709 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ACTBP60709 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC5.39□□□□□ -1.55
ACTBP60709 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ACTBP60709 AC011416.1-201ENST00000514947 1732 ntBASIC5.39□□□□□ -1.55
ACTBP60709 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ACTBP60709 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ACTBP60709 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
ACTBP60709 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
ACTBP60709 AC126474.2-201ENST00000623268 1750 ntBASIC5.39□□□□□ -1.55
ACTBP60709 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.39□□□□□ -1.55
ACTBP60709 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
ACTBP60709 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
ACTBP60709 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
ACTBP60709 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.38□□□□□ -1.55
ACTBP60709 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
ACTBP60709 AC010266.2-201ENST00000564741 3255 ntBASIC5.38□□□□□ -1.55
ACTBP60709 AL355488.2-201ENST00000609909 2850 ntBASIC5.38□□□□□ -1.55
ACTBP60709 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
ACTBP60709 AC092701.1-201ENST00000623627 1551 ntBASIC5.38□□□□□ -1.55
ACTBP60709 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC5.38□□□□□ -1.55
ACTBP60709 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.38□□□□□ -1.55
ACTBP60709 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ACTBP60709 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
ACTBP60709 AC245036.1-201ENST00000391727 309 ntBASIC5.38□□□□□ -1.55
ACTBP60709 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.38□□□□□ -1.55
ACTBP60709 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.38□□□□□ -1.55
ACTBP60709 RN7SKP91-201ENST00000410852 288 ntBASIC5.38□□□□□ -1.55
ACTBP60709 MEAF6P1-201ENST00000416092 327 ntBASIC5.38□□□□□ -1.55
ACTBP60709 AL672212.1-201ENST00000422246 400 ntBASIC5.38□□□□□ -1.55
ACTBP60709 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 AL845321.1-201ENST00000444603 348 ntBASIC5.38□□□□□ -1.55
ACTBP60709 RPL5P10-201ENST00000445207 894 ntBASIC5.38□□□□□ -1.55
ACTBP60709 AC009244.1-201ENST00000450566 258 ntBASIC5.38□□□□□ -1.55
ACTBP60709 AL354872.1-201ENST00000456361 967 ntBASIC5.38□□□□□ -1.55
ACTBP60709 UOX-201ENST00000471089 899 ntBASIC5.38□□□□□ -1.55
ACTBP60709 AC099340.1-201ENST00000475247 599 ntBASIC5.38□□□□□ -1.55
ACTBP60709 AC093878.1-201ENST00000515630 432 ntBASIC5.38□□□□□ -1.55
ACTBP60709 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.38□□□□□ -1.55
ACTBP60709 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.38□□□□□ -1.55
ACTBP60709 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.38□□□□□ -1.55
ACTBP60709 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.38□□□□□ -1.55
ACTBP60709 SETP17-201ENST00000534163 817 ntBASIC5.38□□□□□ -1.55
ACTBP60709 SLC25A51P2-201ENST00000535708 889 ntBASIC5.38□□□□□ -1.55
ACTBP60709 AC023080.1-201ENST00000551663 931 ntBASIC5.38□□□□□ -1.55
ACTBP60709 AC089984.3-201ENST00000552838 363 ntBASIC5.38□□□□□ -1.55
ACTBP60709 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.38□□□□□ -1.55
ACTBP60709 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.38□□□□□ -1.55
ACTBP60709 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 CCL2-202ENST00000580907 736 ntTSL 2 BASIC5.38□□□□□ -1.55
ACTBP60709 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.38□□□□□ -1.55
ACTBP60709 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.38□□□□□ -1.55
ACTBP60709 AC091133.5-201ENST00000603088 301 ntBASIC5.38□□□□□ -1.55
ACTBP60709 AL008723.3-201ENST00000608926 449 ntBASIC5.38□□□□□ -1.55
ACTBP60709 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.38□□□□□ -1.55
ACTBP60709 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.38□□□□□ -1.55
ACTBP60709 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ACTBP60709 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 AL121768.1-201ENST00000613917 2544 ntBASIC5.38□□□□□ -1.55
ACTBP60709 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
ACTBP60709 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
ACTBP60709 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.38□□□□□ -1.55
ACTBP60709 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.38□□□□□ -1.55
ACTBP60709 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.38□□□□□ -1.55
ACTBP60709 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ACTBP60709 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
ACTBP60709 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
ACTBP60709 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ACTBP60709 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ACTBP60709 AC006484.1-201ENST00000435086 1884 ntBASIC5.37□□□□□ -1.55
ACTBP60709 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms