Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-1P43699 OR52H2P-201ENST00000514607 902 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 RN7SKP242-201ENST00000515967 289 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 IGHVIII-25-1-201ENST00000522143 241 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC008429.2-201ENST00000523057 864 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC021820.1-201ENST00000525564 808 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 OR4C1P-201ENST00000530880 937 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC008126.1-201ENST00000549019 480 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AL121839.1-201ENST00000556233 1185 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-1P43699 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-1P43699 ANP32BP1-202ENST00000568553 737 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AP006587.6-201ENST00000582128 1091 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AL583832.1-201ENST00000603227 784 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC015802.5-201ENST00000607478 399 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 CXADRP3-202ENST00000617265 1100 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 RAB28P4-201ENST00000622233 665 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC020763.5-201ENST00000623298 430 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC025262.3-201ENST00000623666 360 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC017002.5-201ENST00000630717 871 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC243725.1-201ENST00000637164 436 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-1P43699 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
NKX2-1P43699 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-1P43699 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
NKX2-1P43699 AC015799.1-201ENST00000622996 3122 ntBASIC5.21□□□□□ -1.57
NKX2-1P43699 MED31-201ENST00000225728 1654 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NKX2-1P43699 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.57
NKX2-1P43699 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
NKX2-1P43699 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
NKX2-1P43699 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
NKX2-1P43699 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.21□□□□□ -1.57
NKX2-1P43699 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-1P43699 NCOA4P2-201ENST00000340589 1813 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
NKX2-1P43699 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX2-1P43699 SEPT7P8-201ENST00000413308 775 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 CDY17P-201ENST00000414121 1282 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-1P43699 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AL929472.1-201ENST00000417484 429 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 MRPS21P5-201ENST00000417885 231 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 AC016027.5-201ENST00000427227 210 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 CDY8P-201ENST00000428380 1279 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 OSTCP2-201ENST00000437956 444 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 AC019185.3-201ENST00000438805 323 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 ARL5AP3-201ENST00000439327 386 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 CDY20P-201ENST00000447528 1279 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 RPL31P20-201ENST00000449593 360 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX2-1P43699 RN7SL390P-201ENST00000470634 284 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX2-1P43699 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AL135933.1-201ENST00000498657 802 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 AC090058.1-201ENST00000498788 435 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AL390198.2-201ENST00000510553 222 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AC026688.1-201ENST00000520639 1168 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AC083973.1-201ENST00000523459 590 ntTSL 2 BASIC5.21□□□□□ -1.58
NKX2-1P43699 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
NKX2-1P43699 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX2-1P43699 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AL132640.1-201ENST00000559594 619 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 GLYATL1P2-202ENST00000588046 902 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 AL035417.2-201ENST00000603887 796 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.21□□□□□ -1.58
NKX2-1P43699 AC104307.1-201ENST00000616142 196 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 AC006213.4-201ENST00000616184 634 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 AC069234.4-201ENST00000621276 412 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.21□□□□□ -1.58
NKX2-1P43699 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.21□□□□□ -1.58
NKX2-1P43699 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms