Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 EIF4B-201ENST00000262056 4148 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 ENSAP3-201ENST00000312710 333 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AL353151.1-201ENST00000402406 604 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AL031577.2-201ENST00000404133 280 ntBASIC8.28□□□□□ -1.08
RFX1P22670 RNU6-757P-201ENST00000410334 100 ntBASIC8.28□□□□□ -1.08
RFX1P22670 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC8.28□□□□□ -1.08
RFX1P22670 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC8.28□□□□□ -1.08
RFX1P22670 AC245060.4-201ENST00000413293 1121 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC8.28□□□□□ -1.08
RFX1P22670 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC8.28□□□□□ -1.08
RFX1P22670 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC8.28□□□□□ -1.08
RFX1P22670 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC8.28□□□□□ -1.08
RFX1P22670 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC8.28□□□□□ -1.08
RFX1P22670 MTND1P1-201ENST00000445453 368 ntBASIC8.28□□□□□ -1.08
RFX1P22670 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC8.28□□□□□ -1.08
RFX1P22670 AL031736.1-201ENST00000449688 618 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AL390026.1-201ENST00000456647 457 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC8.28□□□□□ -1.08
RFX1P22670 RN7SKP198-201ENST00000459286 306 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC091959.2-201ENST00000477363 321 ntBASIC8.28□□□□□ -1.08
RFX1P22670 RPS26P24-201ENST00000497656 331 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC073358.1-201ENST00000505671 684 ntBASIC8.28□□□□□ -1.08
RFX1P22670 MRPL49P1-201ENST00000505951 535 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC093325.1-201ENST00000508378 326 ntBASIC8.28□□□□□ -1.08
RFX1P22670 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC8.28□□□□□ -1.08
RFX1P22670 AC113352.1-201ENST00000513196 666 ntBASIC8.28□□□□□ -1.08
RFX1P22670 SCARNA20.1-201ENST00000516009 138 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC8.28□□□□□ -1.08
RFX1P22670 AC084026.2-201ENST00000521101 642 ntTSL 3 BASIC8.28□□□□□ -1.08
RFX1P22670 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC8.28□□□□□ -1.08
RFX1P22670 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 AP001804.1-201ENST00000526868 919 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC068305.2-201ENST00000550567 1205 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.28□□□□□ -1.08
RFX1P22670 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC8.28□□□□□ -1.08
RFX1P22670 AC068724.2-201ENST00000565685 532 ntTSL 4 BASIC8.28□□□□□ -1.08
RFX1P22670 AC079171.1-201ENST00000568788 914 ntBASIC8.28□□□□□ -1.08
RFX1P22670 ZNF415P1-201ENST00000582279 1166 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.28□□□□□ -1.08
RFX1P22670 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC8.28□□□□□ -1.08
RFX1P22670 VN1R82P-201ENST00000601481 356 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC129492.5-201ENST00000603489 315 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC022001.1-201ENST00000605193 268 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.28□□□□□ -1.08
RFX1P22670 AP003068.4-201ENST00000623192 802 ntBASIC8.28□□□□□ -1.08
RFX1P22670 RBM12B-AS1-201ENST00000623283 653 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC092656.1-203ENST00000624134 423 ntBASIC8.28□□□□□ -1.08
RFX1P22670 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC8.28□□□□□ -1.08
RFX1P22670 AC073488.2-201ENST00000631903 751 ntBASIC8.28□□□□□ -1.08
RFX1P22670 AC016582.3-206ENST00000636547 207 ntBASIC8.28□□□□□ -1.08
RFX1P22670 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RFX1P22670 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RFX1P22670 OR7E91P-202ENST00000642062 1198 ntBASIC8.28□□□□□ -1.08
RFX1P22670 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC8.28□□□□□ -1.08
RFX1P22670 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 AC116351.1-201ENST00000399869 3482 ntTSL 2 BASIC8.28□□□□□ -1.08
RFX1P22670 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
RFX1P22670 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC8.28□□□□□ -1.08
RFX1P22670 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
RFX1P22670 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC8.28□□□□□ -1.08
RFX1P22670 BX664727.3-202ENST00000421686 1761 ntTSL 5 BASIC8.27□□□□□ -1.08
RFX1P22670 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
RFX1P22670 AC010401.2-201ENST00000575137 4934 ntBASIC8.27□□□□□ -1.08
RFX1P22670 ZNF680-201ENST00000309683 3022 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
RFX1P22670 ZNF733P-202ENST00000444809 1573 ntBASIC8.27□□□□□ -1.09
RFX1P22670 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
RFX1P22670 DIP2B-201ENST00000301180 8593 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
RFX1P22670 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
RFX1P22670 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC8.27□□□□□ -1.09
RFX1P22670 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.27□□□□□ -1.09
RFX1P22670 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
RFX1P22670 OR56A4-201ENST00000330728 1209 ntBASIC8.27□□□□□ -1.09
RFX1P22670 RNU6-543P-201ENST00000362576 108 ntBASIC8.27□□□□□ -1.09
RFX1P22670 MIR555-201ENST00000384987 96 ntBASIC8.27□□□□□ -1.09
RFX1P22670 ISY1-202ENST00000393292 988 ntTSL 5 BASIC8.27□□□□□ -1.09
RFX1P22670 AC092952.1-201ENST00000397646 1209 ntBASIC8.27□□□□□ -1.09
RFX1P22670 GSTA10P-201ENST00000412182 576 ntBASIC8.27□□□□□ -1.09
RFX1P22670 RPL34P19-201ENST00000415903 342 ntBASIC8.27□□□□□ -1.09
RFX1P22670 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC8.27□□□□□ -1.09
RFX1P22670 TRBV24OR9-2-201ENST00000416632 435 ntBASIC8.27□□□□□ -1.09
RFX1P22670 AL031584.2-201ENST00000420585 767 ntTSL 3 BASIC8.27□□□□□ -1.09
RFX1P22670 CENPN-204ENST00000428963 971 ntTSL 2 BASIC8.27□□□□□ -1.09
RFX1P22670 AL359502.1-201ENST00000437334 692 ntTSL 3 BASIC8.27□□□□□ -1.09
RFX1P22670 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC8.27□□□□□ -1.09
RFX1P22670 MTND3P1-201ENST00000441336 220 ntBASIC8.27□□□□□ -1.09
RFX1P22670 AC239860.1-201ENST00000444680 1270 ntBASIC8.27□□□□□ -1.09
RFX1P22670 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
RFX1P22670 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.27□□□□□ -1.09
RFX1P22670 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC8.27□□□□□ -1.09
RFX1P22670 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC8.27□□□□□ -1.09
RFX1P22670 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.27□□□□□ -1.09
RFX1P22670 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC8.27□□□□□ -1.09
RFX1P22670 AC092045.1-201ENST00000495716 1231 ntBASIC8.27□□□□□ -1.09
RFX1P22670 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms